Transcript Information: S_Transcript_302083.p1


Annotated TAIR IDAT1G43730.1
Annotated Gene NameRNA-directed DNA polymerase (reverse transcriptase)-related family protein
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr1:16508723-16509784 | Reverse length=320
E-Value3E-08
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 13.5770162950511
Replicate 22.5502686854117
Replicate 34.065334297998
Condition 2: 8 Hour
Replicate 14.1274949000903
Replicate 24.2698958425285
Replicate 33.9537459267304
Condition 3: 24 Hour
Replicate 14.7565472116616
Replicate 23.4117565813856
Replicate 34.813884819256


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_302083.p1 GENE.S_Transcript_302083~~S_Transcript_302083.p1 ORF type:5prime_partial len:372 (+),score=37.20,zf-RVT|PF13966.2|6.5e+03,zf-RVT|PF13966.2|8.5e-18,zf-RVT|PF13966.2|1.3e+04 S_Transcript_302083:3-1118(+)
CACTTGGTGAGTTGGGAGACTGTGTGTAAGCCAAAGGAGGAGGGGGGTTTGGGAGTAGGTAGGTTGGTGTTGCGGAATATTGCCCTAGTGGGTAAGTGGTTGTGGCGCTTTCCTTTGGAACCTTCAGCGCTCTGGCATCTAGTAATTCGAAGTCGCTACGGTGTTCCGGGTCTAGGGTGGGACTCATTGGCGACTTCAGGATCTACCCATGCTTCTCCATGGAAGTTTGTCTCCCAGGTTGCTGTGTTCTACCTTCCCCTTATAGGGTTATCCCTGGGTAATGGGAGGAGAATCCGGTTCTGGGAGGATGTATGGAGGGGAGACGTGGCTCTCCAAGTGCGGTTCCCTCGTATATATCATCTCTCTACGCTTCATGAGGCCACTATTTCGCAGTTCTTCGTGGATGGTTCTTGGAACTTGCATTTGAGGAGACCTGCCAGGGATCAGGAGATGGAGGAGATTGTTTCACTGTTGGGAGTACTGGAAGGGGTGGATATTTCTGGAGAGGAGGATAGGCGGTCTTGGAAAGGGGATTCTTCTGAGTCTTTCTCTTGTGCTTCTTTTCTTAGGAGTTTGCAGGGAACAGGTGGTACCCCTTTCCCGCTGGCTAGCATTTGGAAGGTCAAAGCCCCCCTTAAGGTCAGGGCTTTTGTGTGGACCTTGGCATTAGGGAGGGTTAATACTAACGACATGCGGCAACGTCGCCGCCCTCGGTGTTGCCTCTCGCCGGACGTGTGTGTCATGTGTGGTCTTAGCGGGGAGACGGCCTCTCACCTTTTCCTCCACTGTCCAGCGGTGCGGAGTTTGTGGGATAGGTTGTTTGGGATGTGTTGTGAGACCTGGGTGTGTCCTCCTACAGTGTTGGACTTCCTTCACATGCGTTTTTGGTGTTTCGGATTGAATAAGGAGAAAGGTATCCTATGGCGCAATGCGATTTTGGCGACTTTGTGGTGTGTGTGGCTGGAAAGAAACGCTCGTGTGTTTAAGCAGATGTTCCTCCCTACCCATCTGTTGTGGGACCGTGTCACTTTCCTGGCCTCATTATGGAGTAAGGCTGGGGGAGCTTTCGGTAGCTACTCTCTTACTACTATACAACGCAACTGGGCTATCCTGTAA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_302083.p1 GENE.S_Transcript_302083~~S_Transcript_302083.p1 ORF type:5prime_partial len:372 (+),score=37.20,zf-RVT|PF13966.2|6.5e+03,zf-RVT|PF13966.2|8.5e-18,zf-RVT|PF13966.2|1.3e+04 S_Transcript_302083:3-1118(+)
HLVSWETVCKPKEEGGLGVGRLVLRNIALVGKWLWRFPLEPSALWHLVIRSRYGVPGLGWDSLATSGSTHASPWKFVSQVAVFYLPLIGLSLGNGRRIRFWEDVWRGDVALQVRFPRIYHLSTLHEATISQFFVDGSWNLHLRRPARDQEMEEIVSLLGVLEGVDISGEEDRRSWKGDSSESFSCASFLRSLQGTGGTPFPLASIWKVKAPLKVRAFVWTLALGRVNTNDMRQRRRPRCCLSPDVCVMCGLSGETASHLFLHCPAVRSLWDRLFGMCCETWVCPPTVLDFLHMRFWCFGLNKEKGILWRNAILATLWCVWLERNARVFKQMFLPTHLLWDRVTFLASLWSKAGGAFGSYSLTTIQRNWAIL*

Click here to download the sequence:
Link to NCBI Protein BLAST