Transcript Information: S_Transcript_302085.p1


Annotated TAIR IDAT1G43730.1
Annotated Gene NameRNA-directed DNA polymerase (reverse transcriptase)-related family protein
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr1:16508723-16509784 | Reverse length=320
E-Value1E-08
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10
Replicate 20
Replicate 30.10245964490889
Condition 2: 8 Hour
Replicate 10.47389756260296
Replicate 20
Replicate 30.59210687791615
Condition 3: 24 Hour
Replicate 10.72816278301981
Replicate 20.6295503215652
Replicate 30.14012246891731


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_302085.p1 GENE.S_Transcript_302085~~S_Transcript_302085.p1 ORF type:5prime_partial len:180 (+),score=12.14,zf-RVT|PF13966.2|6.4e-16,zf-RVT|PF13966.2|3.8e+03 S_Transcript_302085:3-542(+)
GAGCCAGCAGGTGGTACCCCCTTCCCGCTAACTAGCATTTGGAAGGTAAAAGCCCCCCTTAAGGTCAGGGCTTTTGTGTGGACCTTGGCATTAGGGAGGGTAAACACTAACGACATGCGGCAACATGGATGCCCTTGTTGGTGCCTCTCGCCGGATGTGTGTGTCATGTGTGGTTTTAGCGGGGAGACTGCTTCTCACCTTTTCCTCCATTGCCCGGCGGTGCAGAGTTTGTGGGCGAGGTTGTTTGGTGTGTGTGGTGAAGCCTGGGTCTGCCCTCCTACAGTATTGGACTTCCTTCACATGCGTTTTTGGGGTTTCGGATTGGATAAGGAGAAAGGTATTCTATGGCGCAATGCGATTTTGGCGACTTTGTGGTGTGTGTGGCTGGAAAGAAACGCTCGTGTGTTTAAGCAGATGTTCCTCCCTACCCATCTGTTGTGGGACCGTGTCACTTTCCTGGCCTCATTATGGAGTAAGGCTGGGGGAGCTTTCGGTAGCTACTCTCTTACTACTATACAACGCAACTGGGCTATCCTGTAA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_302085.p1 GENE.S_Transcript_302085~~S_Transcript_302085.p1 ORF type:5prime_partial len:180 (+),score=12.14,zf-RVT|PF13966.2|6.4e-16,zf-RVT|PF13966.2|3.8e+03 S_Transcript_302085:3-542(+)
EPAGGTPFPLTSIWKVKAPLKVRAFVWTLALGRVNTNDMRQHGCPCWCLSPDVCVMCGFSGETASHLFLHCPAVQSLWARLFGVCGEAWVCPPTVLDFLHMRFWGFGLDKEKGILWRNAILATLWCVWLERNARVFKQMFLPTHLLWDRVTFLASLWSKAGGAFGSYSLTTIQRNWAIL*

Click here to download the sequence:
Link to NCBI Protein BLAST