Transcript Information: S_Transcript_302646.p1


Annotated TAIR IDAT3G03580.1
Annotated Gene NameTetratricopeptide repeat (TPR)-like superfamily protein
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr3:860695-863343 | Reverse length=882
E-Value4E-97
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10.18919195190887
Replicate 20.23526671329103
Replicate 30.2622189964493
Condition 2: 8 Hour
Replicate 10.65694330360836
Replicate 21.0602771867169
Replicate 30.88395102627292
Condition 3: 24 Hour
Replicate 10.23294307039733
Replicate 20.29538143049742
Replicate 30.5677948385038


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_302646.p1 GENE.S_Transcript_302646~~S_Transcript_302646.p1 ORF type:complete len:844 (+),score=127.04,PPR|PF01535.16|1.2e+03,PPR|PF01535.16|33,PPR|PF01535.16|13,PPR|PF01535.16|1.3,PPR|PF01535.16|8.8e+03,PPR|PF01535.16|0.0044,PPR|PF01535.16|3.6e-06,PPR|PF01535.16|1.1,PPR|PF01535.16|5.3e-07,PPR|PF01535.16|9.4e+03,PPR|PF01535.16|24,PPR|PF01535.16|0.33,PPR|PF01535.16|7.9e+03,PPR|PF01535.16|10,PPR|PF01535.16|0.0096,PPR|PF01535.16|0.025,PPR|PF01535.16|6.8e-07,PPR|PF01535.16|0.0015,PPR|PF01535.16|0.1,PPR|PF01535.16|6.8e+02,PPR_2|PF13041.2|1.6e+04,PPR_2|PF13041.2|1.2e+02,PPR_2|PF13041.2|70,PPR_2|PF13041.2|0.01,PPR_2|PF13041.2|3.8e-05,PPR_2|PF13041.2|37,PPR_2|PF13041.2|3.3e-08,PPR_2|PF13041.2|12,PPR_2|PF13041.2|0.011,PPR_2|PF13041.2|15,PPR_2|PF13041.2|5.4e-10,PPR_2|PF13041.2|0.45,PPR_2|PF13041.2|2.6e-10,PPR_2|PF13041.2|0.0072,PPR_2|PF13041.2|7.2,PPR_3|PF13812.2|3.9e+03,PPR_3|PF13812.2|7.7,PPR_3|PF13812.2|0.9,PPR_3|PF13812.2|0.0023,PPR_3|PF13812.2|2.1e+02,PPR_3|PF13812.2|0.068,PPR_3|PF13812.2|22,PPR_3|PF13812.2|1.5,PPR_3|PF13812.2|0.026,PPR_3|PF13812.2|0.048,PPR_3|PF13812.2|0.54,PPR_3|PF13812.2|0.02,PPR_3|PF13812.2|9.5,PPR_1|PF12854.3|1.6e+03,PPR_1|PF12854.3|6.2e+03,PPR_1|PF12854.3|4.7,PPR_1|PF12854.3|0.0051,PPR_1|PF12854.3|1e+03,PPR_1|PF12854.3|0.00016,PPR_1|PF12854.3|3.5e+03,PPR_1|PF12854.3|2.5e+03,PPR_1|PF12854.3|3.2e+03,PPR_1|PF12854.3|1.2,PPR_1|PF12854.3|4.5e+02,PPR_1|PF12854.3|0.0046,PPR_1|PF12854.3|0.05,PPR_1|PF12854.3|0.2,PPR_1|PF12854.3|0.015 S_Transcript_302646:58-2589(+)
ATGCTGAGACCTTTAACTTGTCATTTTCCCGCCAATGCTGTTCTCACTTCTTTGCTGTGCTTCAACCGTTTCTTCACAACCCAAAATCTCTGTGTGTCTCAAACATCTAGCAAAGAGATCACACATGAAAACCCAATTAATTCTCTCATCCAATCTCTCGTTCAAACCTACAAATTCCCACAATCCCTTTTCTTGTTCAAGAAATCCCATTCATTCACTTCCTCCTCAAATTTTGATCCTTCTGTTTTCAATTCACTTTTTCACTCTTGTTCTTCGAGTTCTCATTTAAAATCCGGGAAATCCCTTCATGGGTATTTGATAAAATGTGGTTTTACGTCTTGTATTGGTGCTCGTTTGATGCGTATGTACGTAGTATTTGGTAAAAATCTGGATGCATACCAGGTGTTCGAAGAAATTCCCAAGAGAGGGAAAAAAGATTATGACTTTGTGGTTTGCGGGTTTGGTGCTCGTCGCTTTTTCGAGGAGGTCCTTGTTGTTTTTGAGGAGATGGTAGCATTAGGTTTGTTCCCATGTTTGGAGTCAATTCGCTATGCCATCATTGCTTGTGGTGAGCTTAGGAGATTGGACAAAGGGAGGTGGGTTCACTGTTTTGTTGTTGACAATGGGTTTGATAGGAATGTTCTTATCAGCAATTCATTGATCTCAATGTATATAAAGATGGGCAAGCTTGACTTAGCTCGTGGTACCTTTGATGCAATGGAAGACAGAGACTTGGTTTCTTGGAACACGCTGATCACAGGCTATGCCCAAACTGGGAACTGGGCTGATGCTTTGAGTGCTTACCTAGACATGAAAGACTTAGGAAGTGTGATTCATAATAATATCACCCTTTTGGGTCTAGCTTTTTGTTGTGGTCAGGGTGGGTATCTTGATCAAGGTGAGACTATTCATGGGCACTCTATTCGAGCAGGATTATTGTCTGATTTTCGTTTGGGCACTGCCATCCTTGACATGTATGTCAAGTGTGGGAGTATCGAGTGTGCTGAGATGTTATTTGAGGAGGACACATTTGAAAAGAGTTTGGTTTCTTGGAATTCACTAATCTCTGGCTACTCAAAAGCTGGGTATTATGACAAGGCAGCAGTCTTATTTAAAAATATGTTTATGCAATCGAATTTCAAGCCTGATTCTGTAACTCTTGCAAATGTTATACCTGCATATTCAGGCCTAGGAAGAATTGACGGGATCAGATCAATCCATGCAGTAATTGTAAAGAAAGGCCTTGATCTGGGAGCAGATGTTGTTCTTGGAACTGCTATTGTGGATGGATATGGGAAATGTTTTGACCTAACATCTGCTCGACGTTTGTACAATAGCATCAAGGATACTGATATTCCTACATGGAATGCAATGCTTACAGCGTATTACTTAAATAATGATGCTGATGATGGTATTTTACTTTTGCGTAAGTTGCTTCAGAGCCAGGTTTGCCCTGACGCTGTCACTATTGTCATGCTTCTTCAAATTTGTGGTCAACTTGGTTGTCTAAAGCTAGGGCATATGGCTCATTGCTACAGTCTTATTAAAGGTTTTTCCTTCCATCTTAATGTGGTAAATGCCTTGCTCGACACATACATCAGATGCAGGTCTATGGCGGATTTAGAACAACTTTTTGGACTAATGAAGACTAAAAATATTGTGACATGGAATACTATGCTTTCTGGATATGTTAAGATTGCTTCCTACTCAAGTACCATGAAAGTATTCTCGCAAATGCAGCTTGAAAGTCAATGTGAGCCTGATTCCGTAACATTGATCTGTCTCATTCAGGCGTCTAGAGCGGTTGCGAGTGGTCATGGTGCCCATTTAGCTCATGCCTTTGCCCTAAAACTTGGTTTTACTTATGAAACAGTGGTTTTAAACTCACTAATAGATGCATATGCAAAGAATGGTATTATTGATGATGCAAGTACTTTATTTGGACATAAGGATCGACTAAGAGATCAATGCTCTTGGAATGTAATGATTGGCGCATATGGAATGAATGGTCAGGGAGAAAAGGCTTGCCAACTTCTAAAGCAGATGAATGAAGATGGATATGGACCGGATTCCATTACATTCACTTCTTTGCTTAGTGCTTGTTCCCATTCTGGCATGATTGACGAAGGTTGTAGGTATCTTAACCTGATGATAAACAAGTATAACATTCATCCAGATCTGGAGCATTGGACTTGCATCATTGACATGTTAGGACGGGGTGGTAGATTGGAAGAAGCATATGGACTTCTTACAAGTAGTCTTCATCATAATCCTTCAGGTCTTATTTCTCTTGATTCTGGGGCTGTATGGGGTGCCTTCTTAGATGCCTGTATGACGTACAACAACATAAAACTTGGTGAGCTGGCTGGGAGGAAGCTACAAGAATTGTCTCCTCAAAATAATGGATACCCTATATTATTGTCTAATTTATACGCTTCAAACATGAGATGGGATGAAGCGGTGAAGGCAAGACAAGTGTTTAATGATGGAAATTTGGTCAAGGAACCCGGTTACAGTTCAGTTAAACTTTGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_302646.p1 GENE.S_Transcript_302646~~S_Transcript_302646.p1 ORF type:complete len:844 (+),score=127.04,PPR|PF01535.16|1.2e+03,PPR|PF01535.16|33,PPR|PF01535.16|13,PPR|PF01535.16|1.3,PPR|PF01535.16|8.8e+03,PPR|PF01535.16|0.0044,PPR|PF01535.16|3.6e-06,PPR|PF01535.16|1.1,PPR|PF01535.16|5.3e-07,PPR|PF01535.16|9.4e+03,PPR|PF01535.16|24,PPR|PF01535.16|0.33,PPR|PF01535.16|7.9e+03,PPR|PF01535.16|10,PPR|PF01535.16|0.0096,PPR|PF01535.16|0.025,PPR|PF01535.16|6.8e-07,PPR|PF01535.16|0.0015,PPR|PF01535.16|0.1,PPR|PF01535.16|6.8e+02,PPR_2|PF13041.2|1.6e+04,PPR_2|PF13041.2|1.2e+02,PPR_2|PF13041.2|70,PPR_2|PF13041.2|0.01,PPR_2|PF13041.2|3.8e-05,PPR_2|PF13041.2|37,PPR_2|PF13041.2|3.3e-08,PPR_2|PF13041.2|12,PPR_2|PF13041.2|0.011,PPR_2|PF13041.2|15,PPR_2|PF13041.2|5.4e-10,PPR_2|PF13041.2|0.45,PPR_2|PF13041.2|2.6e-10,PPR_2|PF13041.2|0.0072,PPR_2|PF13041.2|7.2,PPR_3|PF13812.2|3.9e+03,PPR_3|PF13812.2|7.7,PPR_3|PF13812.2|0.9,PPR_3|PF13812.2|0.0023,PPR_3|PF13812.2|2.1e+02,PPR_3|PF13812.2|0.068,PPR_3|PF13812.2|22,PPR_3|PF13812.2|1.5,PPR_3|PF13812.2|0.026,PPR_3|PF13812.2|0.048,PPR_3|PF13812.2|0.54,PPR_3|PF13812.2|0.02,PPR_3|PF13812.2|9.5,PPR_1|PF12854.3|1.6e+03,PPR_1|PF12854.3|6.2e+03,PPR_1|PF12854.3|4.7,PPR_1|PF12854.3|0.0051,PPR_1|PF12854.3|1e+03,PPR_1|PF12854.3|0.00016,PPR_1|PF12854.3|3.5e+03,PPR_1|PF12854.3|2.5e+03,PPR_1|PF12854.3|3.2e+03,PPR_1|PF12854.3|1.2,PPR_1|PF12854.3|4.5e+02,PPR_1|PF12854.3|0.0046,PPR_1|PF12854.3|0.05,PPR_1|PF12854.3|0.2,PPR_1|PF12854.3|0.015 S_Transcript_302646:58-2589(+)
MLRPLTCHFPANAVLTSLLCFNRFFTTQNLCVSQTSSKEITHENPINSLIQSLVQTYKFPQSLFLFKKSHSFTSSSNFDPSVFNSLFHSCSSSSHLKSGKSLHGYLIKCGFTSCIGARLMRMYVVFGKNLDAYQVFEEIPKRGKKDYDFVVCGFGARRFFEEVLVVFEEMVALGLFPCLESIRYAIIACGELRRLDKGRWVHCFVVDNGFDRNVLISNSLISMYIKMGKLDLARGTFDAMEDRDLVSWNTLITGYAQTGNWADALSAYLDMKDLGSVIHNNITLLGLAFCCGQGGYLDQGETIHGHSIRAGLLSDFRLGTAILDMYVKCGSIECAEMLFEEDTFEKSLVSWNSLISGYSKAGYYDKAAVLFKNMFMQSNFKPDSVTLANVIPAYSGLGRIDGIRSIHAVIVKKGLDLGADVVLGTAIVDGYGKCFDLTSARRLYNSIKDTDIPTWNAMLTAYYLNNDADDGILLLRKLLQSQVCPDAVTIVMLLQICGQLGCLKLGHMAHCYSLIKGFSFHLNVVNALLDTYIRCRSMADLEQLFGLMKTKNIVTWNTMLSGYVKIASYSSTMKVFSQMQLESQCEPDSVTLICLIQASRAVASGHGAHLAHAFALKLGFTYETVVLNSLIDAYAKNGIIDDASTLFGHKDRLRDQCSWNVMIGAYGMNGQGEKACQLLKQMNEDGYGPDSITFTSLLSACSHSGMIDEGCRYLNLMINKYNIHPDLEHWTCIIDMLGRGGRLEEAYGLLTSSLHHNPSGLISLDSGAVWGAFLDACMTYNNIKLGELAGRKLQELSPQNNGYPILLSNLYASNMRWDEAVKARQVFNDGNLVKEPGYSSVKL*

Click here to download the sequence:
Link to NCBI Protein BLAST