Transcript Information: S_Transcript_30296.p1


Annotated TAIR IDAT1G22060.1
Annotated Gene NameLOCATED IN: vacuole; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; BEST Arabidopsis thaliana protein match is: FBD, F-box and Leucine Rich Repeat domains containing protein (TAIR:AT1G22000.1); Has 84739 Blast hits to 38714 proteins in 2257 species: Archae - 1436; Bacteria - 11314; Metazoa - 40747; Fungi - 7706; Plants - 4675; Viruses - 308; Other Eukaryotes - 18553 (source: NCBI BLink).
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr1:7773373-7780586 | Reverse length=1999
E-Value5.4e-319
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 16.4262737524183
Replicate 27.2562586124662
Replicate 36.3212576235369
Condition 2: 8 Hour
Replicate 19.8101342450351
Replicate 29.4448316218889
Replicate 311.316942545075
Condition 3: 24 Hour
Replicate 17.3359683363936
Replicate 26.2941608908726
Replicate 36.8164053909349


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_30296.p1 GENE.S_Transcript_30296~~S_Transcript_30296.p1 ORF type:complete len:1876 (+),score=520.98,NT-C2|PF10358.5|4.5e-19,NT-C2|PF10358.5|1e+04,NT-C2|PF10358.5|1.2e+03 S_Transcript_30296:546-6173(+)
ATGTCGAGAGTTACTAAGTGGAAGCTTGACAAGACCAAAGTAAAAGTTGTATTCCGGCTGCAATTCCATGCTACACATATCCCACAAAGTGGATGGAATAATCTGTTTATCTCATTCATTCCTGCTGATTCTGGCAAGGCAACAGCAAAGACAAACAAGGGAACTGTGAGGAATGGAACTTGCAAGTGGGCAGATCCTATCTATGAAACTACAAGACTTCTCCAAGATTCTAAAAACAAACAATATGAAGAAAAGCATTACAAAGTTGTTGTTGCAATGGGTACATCACGGTCTAGTATCCTTGGTGAAGCTAGCATAAATCTTTCAGACTATGTTGATGCGCTAAAGCCTACTGTTGTTGCTTTGCCTCTTCATGGGTCTGAATCTGGAGCTATCTTACATGTTACAGTGCAGCTGTTGACTTCTAAAACTGGTTTCAGGGAGTTTGAGCAGCAGAGGGAAGTAAGTGACAGGGGGTTGCAGGCAAACACTGACCATGATAGTGGAAAGTTATCAATCCCTGGCGATCTGTCAGTTTCACGTACTGATAAGGTAAACACAAGAGTTAGATTCAAGCCAGAGCCTAGGGATCTTCCATCCCTTGAAGAAGAGTCAGGCTTGAGTGAAGAGTATGCAGACTCAGCTGCCGGCCTTGATGGATCTTCCAATACGTCAGGAAGTTTATGTGCAGAAAGGCATGATAACTCTAGTACTCGTGAAATTGACAGTGTCAAGTGCACGGTTTCAGGTGATCTGGGAGGAATCTCTCCTTCTCAAAGCCCAAGAAGCAAGAAAGAACCTTCTGACCATCGGTTCTTGGTGCAAGGTACCAGTGATTGGGTTAATCATTGGGGTGCAGAAAATTCAATGCGGAGTGAAGTTGCCATTGTTCATGAAGAAAATAGTCAACTAAGGGCAGCCTTGGAAGCAGCTGATCAGTCAATTCATGAGCTTAGGCAGGAAATAATCTCCTTGCAAAATCATGCTGGTGACATAGCTGTTGAAACACAAAAGTTGACTGGGCAATTATCTGTTGAGATTTCTTCGGAGCAAGAACTAGTGAAAGAGGTTTCATTGCTTAAATCAGAGTGTGTAAGGTTTAAAGGCGATCTTGAATGGTTGAAAAATTTAAAAATGAATCCTCCTCTTCCTAGAATGAAAACCACTGATCCAGACTTGAGTTTGAAATGGCTAAAGGGTCTTTCAGTTTTGGAGGATAAAATCAGAGAAGTTCAGAACAAGGTGTGTCTTGGATTGCATGGAAAAGAGTCAATGTTTCTGCACTCAGATCTTGAAGCACTACTCACTGTTCTGCAAGACCTTAAACGAGGAACAGACCACTCAGTTTATCAGCTAAATGGAACACCTGATGGAAAAACAGCAAATAGTGAAATGTGTGGCCTTAAAACAGATGATGTAATGTCAGATACAGGTCTTGGGGTTGAGTTGTGTCATCCAGAAGGTGTCCTTCTACCTGGGCTATTGGCTCAAGGAGCTGGTTCGGTGGATACCACTAATGCGATGCAAGGAGAAATTTTCAAACTTCTCAGGGAACTAGATGACTCCAAAGCTGAACGGGAAACCCTCGTGAGAAAGATGGATCAGATGGAGTGTTACTATGAAGCACTTATTCAGGAGCTTGAGGAAAACCAGAAGCAAATCCTTGGTGAATTGCAGAATCTGAGGAATGAACATTCCACTTGCATATATACGATTTCATCCACTAAGGCTCAGATGGAGGCAATGCATCAACAGATGAATGATGAGCTGCTACAACTTGCTGAGGAGAGATGCGCTTTGGATACCCTGAACAAAGAGCTCGAAAGACGAGCTGTTTCTTCAGAAGCAGCCCTGAGAAGGGCAAGATTAAATTACTCAATTGCCGTAAATCAATTACAAAAGGACCTTGAAGTCCTTTCATCGCAGGTTGTTTCTATGTATGAGACCAATGAAAACCTCATTCGAAAAGCATTTGAAGCTTCACAGCCTCTGCTTCAAGATCAAGAAGCTCCATCAAGGGACCTCGATGCTGATGACTTCGATATCGATAATCTCACACTGCCTCAAAACCACATTACTGGTGTAAAAACTCAGCGTTTGGGAAGTGATAGACTGCTAATGGATTTAAGGAGGTCACTAGCATTGCAGGAAGAGCTGTATGAGAAGATACAGGAAGAACTATCTGAGATGCATCTTGCAAATATACATCTGGATGTTTTCTCAGTGATGCTACACCAAGCCTTATTAGAAGCAGTTGATGACAGTAGACTTGCAAGAGAAGAGATGCATGAATTCAGAAAGCAGGTGGAGCTTTTTTTGAAGTCTAATGAATCTTTAGAGCTGAAACTGCAGAATACTGTGGCAGAAAAACATGCTCTGATTGAAGAAAAGGCTATTTCTCTTTCGAGGTGTAATGACTTTGCTTTGCAGAATCAAACTTTGGAAGCTGATCTGAAGACGCTTTCTGATGAGAAGTGTATTCTTAACGAGAAGCTTGCAGAATTGGAGTCCCTGGTGCTGGAACACACAAGCTACAAGAGCAGATATGAAGAATGTGAGGCTAATAAAGCTAAGCTGGAAAATATTTTAGTACAGGCTGCTGTGGAGAAAGAGCATCTTTCAAGTGAAATGTCCTTATTGCAGGAAGAACTCGGGACCATGAAGAGTAAAGTCAGTGCACTTTCTTCTGCAAATGAGAGTTTCCAGAAAATGATTGACCGTCTTCGAACAAGGCTGGAGAGTGTACTGACTTCTGGCAATGAGCAAGTTGATCGCTTGTCTTCCTGTGATGATGTAGAGGACCAAAGTTCAGAGTCTGAAGACCTTGTCAATATTATGTTGCGGTTAGAAGAGCTCCACCAAAATTTCCATTCTAGAATTCGCCAACTCATGAAAGAGAAGGAAGATCTTTTGAATGAACGTGATTTTGCTCAAGTCTCTTCAGCAAATGCCAAATCTGAAGTAGAGATTTTGAAACAGAAATTTCAAAATGATGTACCAGATGTGGTTAATAAATTGAATTTGTCCAGTGCTCTTGTCGGGAAGCTTCAAGCAGATCTTGAGCTTGTTGGTAACAAAATGAAGGTTAGCTCAGAAGCAGAGGAAGAATATACACGGAGGACAGAAGATCTTTTGGTTGATTTTGCAAAAATGGAGGCTGCCTTACAGGAACTCACTACCAGAAATAGGGATCTTGCTGATGAAATAATGTCTTTAGGAACTGTTGCTGATGAGATAGAACAAAATAAATTGAACATGGATAAAATAACAAAGGAAAACCTCAACCTCATGTCGCTTTTGCAGAGTAAGACTGATGAATCTGACAAGCTCACATTGGAGCTTAATAATTTACAAGGAACTATGGGAAGCTTGCAGGATGAATTATCCCTTGAGAGGGGCATTAGAGAGCAACTCGAGGCTGAAGTTTTGAATCTGAATGCCCAGGTGAAAAAGATAGACGAGAAATTTCCCCATCTTGAGCAGCAGAAAGCTGAATTGAGCCACCTGAAGTTACAGCTTTCTGATATGGAGTCAGAAAAATCTAGTGTACACCATCAGCTGTCTCATCTTGAGAACCACTTGATGAAGGCTCGGGAGGACTTCTCTGATCTGGAAATCCAGTTATTGGATATGCATGAATTGTTAGTAGCTGCAAATGTTTCTAATAATGTTGTTGTAGAGCAGTGTAAATGCCATACTGAAGAATTCTTACAGTGTCTCCAAGAGGCTTACAAGCAGAATACCGACCTAGGTACCAGGCTAACCAACTGCCTCGCTAGTGAAGCAAATTACGCTGAGGAGAACTCTAGGTTAGTGGCCGAACTTGATTGTCTAAAATCTGAGTCAGAATCATGTCGTTCTTTGAACAAAGATCTTGAGCACTCCAACAGTGCCATATCCTTGAAATTGAAAGAGTACAAGAACAGGAGTGATCTTTTGGAGAGTAAGTACCTGAATGCTACAACAGAGCACAAGTTTGAGATAGAAGAGCTGAAGTGCTTGCTTGAATGTTGTCAGAATGAAATTGACGCTTTGATATTCTCAAAAGAAGATCTGGAGATAAGGTTTTTGGTACTAAAACAAAATGTGGATGAGACAAATGCTCAGATAAACTTGCAGGAAGAGCATAGAGAAGAACTGATTATGCTGCAGAAGCAGTGTGGCGAGCTTAGTCGTAAGCTCTCTGAACAGATTCTGAAGACAGAGGAGTTCAAGAACCTGTCTATCCATCTGAAAGAACTTAAAGACAAAGCTGATTCTGAGCAACATCAAACCCAAGAAAAGAGGGAAGCTGAGGGATCATCGGTTGCTATGCAAGAATCCTTGAGGATAGCATTCATCAAGGAGCAATATGAAACTAAGCTGCAAGAAGTTCGGCTTCAGTTGTCTATTTCCAAAAAGCATGGTGAAGAGATGCTGTGGAAATTACAAGATGCTCTTGATGAGCTTGAGGATAGGAAAAAATGTGAAGCATCCCTGTTAAAAAGTAATGAAGATCTGCTTTCAAAAATTGCGGAGTTGGAGGTTGAGTTACAATCAGTGCTTTCTGATAACCGTGAAAGATTTATGGCGTATGACCAGATAAAAGCTGAGCTAGACTGCTCAGTTATGAGTCTTGATTGCTGCAAGGAAGAAAAGAGACAGCTTGAGGCTTCTTTGCAGGAATGCAATGATGAGAAATCTAGACTAGTTGATGAAATTGAATTAATGAGAGTACAGCTAGAGAATCTCAAAGCATTCATGAGAAGTCCAGAAAACAAAGAGGATGGCAGTCACTTAGAACATAAATGCTTGAATGAGCCAGTTAGGGGTGAGAATCTTGTGGAAAAGTCACTTCAAAGCACTCTATACTGTGCAGGAGAAACTCCGCGTGATGTGTCAATTAGTTATTCTTCTGCAGATCAAGCAAACAGTGGGAAAGAAGGAGAAATTAATCAGCAATCACAACAGGGTTCGTTACCAACCAATGCAACAGAAGAAATTTCAAGCCTGTCAAATGGACAAAAGGATTCTCTGCAAGATGATGTAAGGCGCACAGCTCTTCTCAACGATCAGTTAAAAGCACAAAAGCTATTGTCTACCATGGATCGCCTACACCAGGAGTTGGAAAAGATGAGAAGTGAAAATATGCTTCCTTCTGGAGATGAAATCCCAGATGGACCAGACAGTGGTGAAGGTTTACACAGTGAACAAGCTCACCTAGAGAAGGTAACTGAGGAACTGGGAAACATGTCTTCTCTATATTATGACTCCGCAAGGAATGGGAACTCGATAGAAAGGGTGCTTGCTCTGGAGCTGGAGCTTGCTGAAGCCTTGCAGTCAAAGAAGAAATCAAGCATCCAATTTCAGAGTTCGTTCCTGAAGCTACACAGTGATGAAGCGGCAGTATTCCAAAGTTTTAGGGACATAAATGAGCTGATCAAAGACATGTTGGAGATCAAGGGAAGGCACGGTTCTATGGAGAAGGAACTCAAAGAGATGCATGAGCGGTACTCTCAACTGAGCCTGCAGTTTGCCGAGGTTGAAGGAGAGAGACAGAAGCTTATGATGACACTCAAGAATACGCGTTCATCCAAAAGGATTCTAAGTCGATCCCCCTCGTCCTGCCAAGAGGACTCATCTTTGTGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_30296.p1 GENE.S_Transcript_30296~~S_Transcript_30296.p1 ORF type:complete len:1876 (+),score=520.98,NT-C2|PF10358.5|4.5e-19,NT-C2|PF10358.5|1e+04,NT-C2|PF10358.5|1.2e+03 S_Transcript_30296:546-6173(+)
MSRVTKWKLDKTKVKVVFRLQFHATHIPQSGWNNLFISFIPADSGKATAKTNKGTVRNGTCKWADPIYETTRLLQDSKNKQYEEKHYKVVVAMGTSRSSILGEASINLSDYVDALKPTVVALPLHGSESGAILHVTVQLLTSKTGFREFEQQREVSDRGLQANTDHDSGKLSIPGDLSVSRTDKVNTRVRFKPEPRDLPSLEEESGLSEEYADSAAGLDGSSNTSGSLCAERHDNSSTREIDSVKCTVSGDLGGISPSQSPRSKKEPSDHRFLVQGTSDWVNHWGAENSMRSEVAIVHEENSQLRAALEAADQSIHELRQEIISLQNHAGDIAVETQKLTGQLSVEISSEQELVKEVSLLKSECVRFKGDLEWLKNLKMNPPLPRMKTTDPDLSLKWLKGLSVLEDKIREVQNKVCLGLHGKESMFLHSDLEALLTVLQDLKRGTDHSVYQLNGTPDGKTANSEMCGLKTDDVMSDTGLGVELCHPEGVLLPGLLAQGAGSVDTTNAMQGEIFKLLRELDDSKAERETLVRKMDQMECYYEALIQELEENQKQILGELQNLRNEHSTCIYTISSTKAQMEAMHQQMNDELLQLAEERCALDTLNKELERRAVSSEAALRRARLNYSIAVNQLQKDLEVLSSQVVSMYETNENLIRKAFEASQPLLQDQEAPSRDLDADDFDIDNLTLPQNHITGVKTQRLGSDRLLMDLRRSLALQEELYEKIQEELSEMHLANIHLDVFSVMLHQALLEAVDDSRLAREEMHEFRKQVELFLKSNESLELKLQNTVAEKHALIEEKAISLSRCNDFALQNQTLEADLKTLSDEKCILNEKLAELESLVLEHTSYKSRYEECEANKAKLENILVQAAVEKEHLSSEMSLLQEELGTMKSKVSALSSANESFQKMIDRLRTRLESVLTSGNEQVDRLSSCDDVEDQSSESEDLVNIMLRLEELHQNFHSRIRQLMKEKEDLLNERDFAQVSSANAKSEVEILKQKFQNDVPDVVNKLNLSSALVGKLQADLELVGNKMKVSSEAEEEYTRRTEDLLVDFAKMEAALQELTTRNRDLADEIMSLGTVADEIEQNKLNMDKITKENLNLMSLLQSKTDESDKLTLELNNLQGTMGSLQDELSLERGIREQLEAEVLNLNAQVKKIDEKFPHLEQQKAELSHLKLQLSDMESEKSSVHHQLSHLENHLMKAREDFSDLEIQLLDMHELLVAANVSNNVVVEQCKCHTEEFLQCLQEAYKQNTDLGTRLTNCLASEANYAEENSRLVAELDCLKSESESCRSLNKDLEHSNSAISLKLKEYKNRSDLLESKYLNATTEHKFEIEELKCLLECCQNEIDALIFSKEDLEIRFLVLKQNVDETNAQINLQEEHREELIMLQKQCGELSRKLSEQILKTEEFKNLSIHLKELKDKADSEQHQTQEKREAEGSSVAMQESLRIAFIKEQYETKLQEVRLQLSISKKHGEEMLWKLQDALDELEDRKKCEASLLKSNEDLLSKIAELEVELQSVLSDNRERFMAYDQIKAELDCSVMSLDCCKEEKRQLEASLQECNDEKSRLVDEIELMRVQLENLKAFMRSPENKEDGSHLEHKCLNEPVRGENLVEKSLQSTLYCAGETPRDVSISYSSADQANSGKEGEINQQSQQGSLPTNATEEISSLSNGQKDSLQDDVRRTALLNDQLKAQKLLSTMDRLHQELEKMRSENMLPSGDEIPDGPDSGEGLHSEQAHLEKVTEELGNMSSLYYDSARNGNSIERVLALELELAEALQSKKKSSIQFQSSFLKLHSDEAAVFQSFRDINELIKDMLEIKGRHGSMEKELKEMHERYSQLSLQFAEVEGERQKLMMTLKNTRSSKRILSRSPSSCQEDSSL*

Click here to download the sequence:
Link to NCBI Protein BLAST