Transcript Information: S_Transcript_303092.p1


Annotated TAIR IDAT4G29090.1
Annotated Gene NameRibonuclease H-like superfamily protein
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr4:14333528-14335255 | Forward length=575
E-Value5E-31
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 11.4646823109705
Replicate 21.3517181556525
Replicate 31.0724747878314
Condition 2: 8 Hour
Replicate 10.79721085297693
Replicate 21.6261987588586
Replicate 31.2174160106687
Condition 3: 24 Hour
Replicate 11.2929993343342
Replicate 21.482679262004
Replicate 31.8857603293545


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_303092.p1 GENE.S_Transcript_303092~~S_Transcript_303092.p1 ORF type:complete len:963 (+),score=97.53,RVT_1|PF00078.23|5.6e-41 S_Transcript_303092:1508-4396(+)
ATGCCAACACCGCGAACAACCATGAAACTCTTAAGCTGGAATTGTCGGGGGTTGGGCAACCCTCGCACAGTTACTGCCCTCCGAGATCGATGCTGGAGGGAGCGCCCAAATATCGTTTTCCTAATGGAGGCGATGGTAGACAGTAGAATCCTAGACGATGTTCGAATGAGATGTGGTATGACTGGTGGTGTTAACTTGAGTAGCATTGGTAATTCGGGAGGCTTAGGTCTGTGGTGGCATGACTTAGATGTTCGAATAATTTCATACTCCAGACATCACTGTTTGGGAGAGATCCTAAATGATGCTGGAGATCCTATATGGGCGGTGGCAGGCGTCTATGGTTGGCCGGAGTCCACTAATAAACATCTCACATGGCAGCTGATACATGACTTAAAGGCTACCTGCAATGTTCCTATGATATTTTTTGGTGACTTTAATGAAATCACAGGTGGCCATGAGAAAGAAGGTGGTGTATCCAGGCAACAAAGTTGTATGGATGGCTTTAGAGAGGTTATTGATGTTTGTGGGCTGCGGGATTTGGGTTACAGAGGTCCAAAATTCACATGGCAGCGGGGGGCTATACGCGAACGGCTGGATCGTTTCCTAGCGGAGGAGGAATGGGCAGAATTATTCCCGCACGCTTGTGTAACCCATTTTCCAATATACAGCTCTGACCATTGTCAGATCCTTCTATCCTCTGAACAACAGACCCAAAGAAAAAGAGGCCGAAGAAGCTTCAAGTTCGAACCTGCTTGGCTTTCGCATGACGAGTGTCAACCTTTGGTCCAGCAAGCTTGGGAGGCTACCATAGGCTCACCGGTTGAAAAAATTGCTGGTTGTGGTGTAAGACTCTCTGAGTGGGCTAGACAAAAGTTCGGCAACGTCAAACGAAAAATCAAAGAGGCGGAAAAGGAATTGAGTGATCTCCAACTCTTGGCGCCATCGGCTGATGTTCTAGCAAAATGCAAGGACGTGGCTAGTAAGCTGGAATCCCTCTTGAAAGAAGATGAAACCTACTGGTATGTCCGAGCCCGAGCCAATGAGTTGAGAGACGGAGATAAAAATACGTCCTATTTCCACCATAAGGCGAATCAGAGACGACGGCGCAATTTAATCAAGGGGCTGTTGGACGATAACGGGGTTTGGACAGAATCTGAGGAGGACATTGAACGCATCATTATTGATTACTACAGTTCCCTTTTCACCTCGTTTGAACCGGTGAATCTAGACCCTGCACTAGAAGGAATCGAGCAGATTGTTACAGAGGAGATGAACGAAGACCTTATCAGAGATCCCACACCAGAGGAGATCTATGAAGCACTTAACCAAATGCACCCTACTAAGGCCCCAGGGCCTGACGGTATGCACGCCCTCCTTTATCAAAAATATTGGCATATTGTTGGCCCTGATGTTATTTCTTATGTTAAAAACTGGTGGAGTGGTTTAGTTGACATTTCACACAGCAATAGAACCAATATTGTGCTAATCCCAAAAGTTAAGGAGCCTAGAACTATACCTGAGTTTAGACCCATTAGTTTATGCAATACCCTCATCAAAATCATCACTAAAATGCTTGCTAATAGGCTAAAAACTCATCTTCCTATACTCATTTCGGCCAACCAAAGTGCTTTTGTTCCTAATAGACTCATTACTGATAATGCACTAGTGGCTTTTGAGATTTTTCATAAGATGAAGAGATCAAATGAGAGGAGACGTGGGAGCATGGCCTTAAAGCTTGACATGTCAAAAGCCTATGATAGGGTGGAATGGTCTTTTCTAGAGAAGTTAATGGAGAGAATGGGGTTTAGTTTGATATGGATTAATAAAGTGATGGATTGCCTCTCCAAGGTTTCTTATTCCTTGGTTGTCAATGGTTATGCAAAGGGGTCTATTTTGCCGTCGAGGGGGCTCCGTCAAGGAGACCCCTTATCTCCTTATCTTTTCATTTTATGTGCAGATGCTTTTTCCCGCTTGCTATCCAAAGCTGCAACAAATAATGAGATTCATGGTATCAAAGTGTGCCGCGGTGCGCCAACTGTATCACATCTTTTTTTCGCCGATGATAGTATCCTTTTTGCGAGGGCAAATCTCCAAGAATGCTCCAAGATAGCTAATATAATTAGCACCTATGAACGAGCATCAGGGCAGAAAATAAACTTTCAAAAAACAGAGATTTCCTTTAGCAAGAATGTGCCGACAGCAACTAGAAGTGATATTGTGTCCATGCTCGGCGTTAAAGAGGTTTGTAAGCATGAGAAATATTTAGGCCTACCAACTATAGTGGGAAAGTCTAAGAAGGCCATTTTTATGGGTCTTAGAGAGAGAATATGGAAGAAGCTACAGGGATGGAAAGAGAAACTTCTGTCAAGGCCGGGGAAGGAGGTCCTCATCAAGGCGGTTGCGCAGGCCATTCCTTTATACATGATGAGTATTTTTAGGCTTCCTGTTGAGCTTGTTGATGACATTCACGCTATCTTAGCACGCTTTTGGTGGGGAGCAAAAGATGGGGAGCGGAAGCTCCACTGGAAAAGTTGGGAATCACTTTGTCAACCGAAGTGTCAGGGTGGGATGGGCTTCCGTGATTTAAAAGTTTTCAACCAGGCGCTATTGGCTAAACAAGGATGGAGATTGGCTTTGGGGGGAAATTCTTTAATGCACCAGATCTTCAAAGCAAAATATTTCAAAAATTCAGATTTCTTGTCATCCTTTTTGGGAGGGGACCCAAGCTTTATTTGGCGGTGCATTTGGGGGGCGAAGTCTTTATTGCTTGAGGGATTAAGATGGAGAGTGGGGGATGGGCGACATATCAAAGTCTGGGATAGTGCTTGGCTCCCTGATTACGTCGTTGACGGCATCGAGGATCATCAGGATGACCTTAGTGGCGTTTAG

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_303092.p1 GENE.S_Transcript_303092~~S_Transcript_303092.p1 ORF type:complete len:963 (+),score=97.53,RVT_1|PF00078.23|5.6e-41 S_Transcript_303092:1508-4396(+)
MPTPRTTMKLLSWNCRGLGNPRTVTALRDRCWRERPNIVFLMEAMVDSRILDDVRMRCGMTGGVNLSSIGNSGGLGLWWHDLDVRIISYSRHHCLGEILNDAGDPIWAVAGVYGWPESTNKHLTWQLIHDLKATCNVPMIFFGDFNEITGGHEKEGGVSRQQSCMDGFREVIDVCGLRDLGYRGPKFTWQRGAIRERLDRFLAEEEWAELFPHACVTHFPIYSSDHCQILLSSEQQTQRKRGRRSFKFEPAWLSHDECQPLVQQAWEATIGSPVEKIAGCGVRLSEWARQKFGNVKRKIKEAEKELSDLQLLAPSADVLAKCKDVASKLESLLKEDETYWYVRARANELRDGDKNTSYFHHKANQRRRRNLIKGLLDDNGVWTESEEDIERIIIDYYSSLFTSFEPVNLDPALEGIEQIVTEEMNEDLIRDPTPEEIYEALNQMHPTKAPGPDGMHALLYQKYWHIVGPDVISYVKNWWSGLVDISHSNRTNIVLIPKVKEPRTIPEFRPISLCNTLIKIITKMLANRLKTHLPILISANQSAFVPNRLITDNALVAFEIFHKMKRSNERRRGSMALKLDMSKAYDRVEWSFLEKLMERMGFSLIWINKVMDCLSKVSYSLVVNGYAKGSILPSRGLRQGDPLSPYLFILCADAFSRLLSKAATNNEIHGIKVCRGAPTVSHLFFADDSILFARANLQECSKIANIISTYERASGQKINFQKTEISFSKNVPTATRSDIVSMLGVKEVCKHEKYLGLPTIVGKSKKAIFMGLRERIWKKLQGWKEKLLSRPGKEVLIKAVAQAIPLYMMSIFRLPVELVDDIHAILARFWWGAKDGERKLHWKSWESLCQPKCQGGMGFRDLKVFNQALLAKQGWRLALGGNSLMHQIFKAKYFKNSDFLSSFLGGDPSFIWRCIWGAKSLLLEGLRWRVGDGRHIKVWDSAWLPDYVVDGIEDHQDDLSGV*

Click here to download the sequence:
Link to NCBI Protein BLAST