Transcript Information: S_Transcript_303096.p1


Annotated TAIR IDAT4G29090.1
Annotated Gene NameRibonuclease H-like superfamily protein
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr4:14333528-14335255 | Forward length=575
E-Value1E-68
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10.66231451037779
Replicate 20.44924232130686
Replicate 30.64674753234346
Condition 2: 8 Hour
Replicate 11.2544347245372
Replicate 21.2653760542832
Replicate 31.2538733885283
Condition 3: 24 Hour
Replicate 10.79076501323418
Replicate 20.71785828522367
Replicate 30.54210276436336


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_303096.p1 GENE.S_Transcript_303096~~S_Transcript_303096.p1 ORF type:3prime_partial len:884 (-),score=104.56,RVT_1|PF00078.23|9.3e-39,zf-RVT|PF13966.2|3.5e-18,RVT_3|PF13456.2|4.4e+02,RVT_3|PF13456.2|6.3e+03,RVT_3|PF13456.2|1.5e+03,RVT_3|PF13456.2|3.4e-06 S_Transcript_303096:2-2650(-)
ATGAATGCGATTTTGGACGCAGAGCCTACACACGAGGAAATCTTTAACGCTCTTAACCAAATGCACCCAAAGAAAGCGCCTGGCCCAGATGGTATGCATGCACTTTTCTTTCAAAAATTCTGGCATATAGTTGGGGCAGATCTGATAGCCTATGTCAAGTCTTGGTGGAATGGGAAAGAGGACCTGAGCTCTATCAACACCACTAATATTGTGTTAATCCCCAAAACCAAAGATCCAAAACGCATGATTGAATTCCGACCCATTAGTTTATGTAATGTGCTCTATAAAATCATCTCCAAAACCCTAGCTAATAGACTTAAGAAACTCCTTCCCCTCATTGTTTCTGAAAACCAAAGTGCTTTCATCTCTGGGAGATCGATCACTGACAATGCTTTGGTAGCTTTTGAAATTTTTCATTCTATGAAACACAAAAAAGGGAGGAGAGGGACTATGGCTTTAAAGTTAGACATGCGTAAGGCATATGATAGAATTGAGTGGGTTTTTTTGGAAAAAGTCATGTTAAAGTTGGGCTTTGGAAATGCTTGGGTCAATCGGGTGATGCAGTGGCAGCAGTGCCTTAGAAGTGTATCCTTTGCTTGTGTCATCAATGGGCAGCAGAGAGGTAGGATCAGACCAACGAGGGGCCTCCGACAAGGAGATCCCATGTCACCTTACCTCTTCATTTTATGTGCAGATGCTTTTTCCACCTTATTGGAAAAGGCGGCTATGAGAAAGAAGATACATGGAGCGTGTGTTTGTCGGGGTGCACCAGCTGTTTCTCACCTGTTTTTTGCTGATGACAGCATTCTCTTTTCCAGAGCAACTACACAAGAATGCGCTAAGATTGCAGATATCATAGCATTGTATGAAAGAGCATCGGGGCAAAAAGTAAACTTTGATAAGACCGAGGTGGCTTTCAGCGCAAATGTGCGGAGCACCTCTCGTGATGCTATTCGAAGGCTACTGAATGTCCGCGAAGTTGAGCGCCATGAGAAATATCTTGGACTCCCAACAGCGATCGGTAGATCAAAGAAAGCAGTTTTTGCGGGTCTTAAGGAGCGAATATGGAAAAAAGTACAAGGCTGGAAGGAAAAATTACTCTCTAAGCCGGGCAAAGAAGTGCTAATCAAGTCGATAGTTCAAGCCATCCCAACATATGTTATGAGTATTTTCAGACTACCAGATGGGTTGTGTGAGGAGATACAGGGTCTCATGGCAAAATTCTGGTGGGGAAGCACGGAAGAAAAGAGGAAAATGCATTGGAAAAGCTGGGATAAGCTCTGTCTCCCAAAATCTCATGGTGGCTTGGGATTCAGGGATATAAAAACTTTCAACCAGGCACTCCTGGCAAAACAAGCTTGGCGTCTCACTAATGGGGAAAATTCACTCCTCCACAGAGTGCTGAAGGCAAGGTATTACAAGAATTCAGACTTTGTAAGCTCCTTTCTGGGCTCTAATCCAAGCTATACATGGAGGAGCATTTGGGGCTCAAAATCCTTATTGCTTGAAGGGCTCAAATGGAGGGTAGGTAATGGCGTGGACATCAATGTGTTCACCGAGGCTTGGCTCCCGGGCGACTCATCCGTGGTGGTCCCAACATCCAATAATGAGAATATGGCGCAACTGCGAGTGGTGGACCTTATCAACGTTCAAGATAAGTGCTGGAATGAACCCCTCATTGATAGCATTTTTTCCCCAGATGATCGGAGGAGTATTCTGAGCATCCCCCTTAGCGACAGACTCCTGAGAGATAAGAGGTACTGGTGGCCAACTAATGACGGCCAGTACTCTGTACGGTCTGGATATTGGCTGGGTAGGCTGGGCAAGAGAGGGACGGAGCAAACTTCGGAGTCTGATATTGCTTTCTGGAAGAAAATCTGGCATTTGGATGCACCACCAAAGTTAAAGCATTTTGTGTGGAGGGCCTGCACTGAGTGTCTAGCAGTGAAAGCAAATTTATCGCGAAGACATATTGTTGAGGATGGCCTATGTCAGATATGCGCAAATGAGATAGAGGCTACAAACCATGCTTTCTTTAATTGTGTGTTTTCCCAACATCTTTGGTCTTCTGATGATTTCCTTATGATGCTCCTGGAGGCACCCACTGAGTCTTTCTTCGAGCGGGCCAAATGGTGTTGTGGAAGATTAAAGGGTGAAGAGAACACTAAATTCTTGGCAGTAGTATGGGCTGCTTGGTTCTGTAGAAATACGAATATCTTTGAATCTATACGACCTAATGTGGGGATGATCAAAGAACGCTTTCTCAGTTTGGTGCGAGATTACATATTTTATCAGAACGCTACAAACAAGGCCCATAGCAGAGGGCCAAGTGTAGTGTCACTGGAGGACTGGCAACCTCCGGACGCAGGCTACGTCAAGGTCAATTGTGATGCAGCTATGCTTGATAATGGGGTGATTGGGATGGGGTGTGCGATAAGGGATGGATATGGAACTATTATGGCACTGGGCGTCAAAAGAATCACAGCACAATGGAATGTCAAGATGGCTGAGGTTGCTGCTCTTTTATTTGGTCTGAAGGTAGCGCAAAAAATGCGGATTCAAAACATCATGGCTGAGACTGACTCTCTAGGCACAGTCACCTGTATAATAAACCAGAAGATGGACCTCTCACCTTTGGGACAGATTGTT

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_303096.p1 GENE.S_Transcript_303096~~S_Transcript_303096.p1 ORF type:3prime_partial len:884 (-),score=104.56,RVT_1|PF00078.23|9.3e-39,zf-RVT|PF13966.2|3.5e-18,RVT_3|PF13456.2|4.4e+02,RVT_3|PF13456.2|6.3e+03,RVT_3|PF13456.2|1.5e+03,RVT_3|PF13456.2|3.4e-06 S_Transcript_303096:2-2650(-)
MNAILDAEPTHEEIFNALNQMHPKKAPGPDGMHALFFQKFWHIVGADLIAYVKSWWNGKEDLSSINTTNIVLIPKTKDPKRMIEFRPISLCNVLYKIISKTLANRLKKLLPLIVSENQSAFISGRSITDNALVAFEIFHSMKHKKGRRGTMALKLDMRKAYDRIEWVFLEKVMLKLGFGNAWVNRVMQWQQCLRSVSFACVINGQQRGRIRPTRGLRQGDPMSPYLFILCADAFSTLLEKAAMRKKIHGACVCRGAPAVSHLFFADDSILFSRATTQECAKIADIIALYERASGQKVNFDKTEVAFSANVRSTSRDAIRRLLNVREVERHEKYLGLPTAIGRSKKAVFAGLKERIWKKVQGWKEKLLSKPGKEVLIKSIVQAIPTYVMSIFRLPDGLCEEIQGLMAKFWWGSTEEKRKMHWKSWDKLCLPKSHGGLGFRDIKTFNQALLAKQAWRLTNGENSLLHRVLKARYYKNSDFVSSFLGSNPSYTWRSIWGSKSLLLEGLKWRVGNGVDINVFTEAWLPGDSSVVVPTSNNENMAQLRVVDLINVQDKCWNEPLIDSIFSPDDRRSILSIPLSDRLLRDKRYWWPTNDGQYSVRSGYWLGRLGKRGTEQTSESDIAFWKKIWHLDAPPKLKHFVWRACTECLAVKANLSRRHIVEDGLCQICANEIEATNHAFFNCVFSQHLWSSDDFLMMLLEAPTESFFERAKWCCGRLKGEENTKFLAVVWAAWFCRNTNIFESIRPNVGMIKERFLSLVRDYIFYQNATNKAHSRGPSVVSLEDWQPPDAGYVKVNCDAAMLDNGVIGMGCAIRDGYGTIMALGVKRITAQWNVKMAEVAALLFGLKVAQKMRIQNIMAETDSLGTVTCIINQKMDLSPLGQIV

Click here to download the sequence:
Link to NCBI Protein BLAST