Transcript Information: S_Transcript_30327.p2


Annotated TAIR IDAT3G11530.1
Annotated Gene NameVacuolar protein sorting 55 (VPS55) family protein
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr3:3628801-3629885 | Reverse length=113
E-Value1.5E-75
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 162.65580605763
Replicate 251.943102973992
Replicate 356.054300222597
Condition 2: 8 Hour
Replicate 165.655335543299
Replicate 265.001670457158
Replicate 355.723318148455
Condition 3: 24 Hour
Replicate 170.35084525711
Replicate 248.182906500896
Replicate 353.025872883197


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_30327.p2 GENE.S_Transcript_30327~~S_Transcript_30327.p2 ORF type:complete len:127 (+),score=18.62,Vps55|PF04133.10|3.7e-33 S_Transcript_30327:169-549(+)
ATGGCCATGACAGTTGAAGTGCTTGCTGGGCTTGCTTTTATGTTCTCCGCTAGCATCTTGCTGCAGATACTGGCATGTGCACTATACAGTAACTGGTGGCCAATGTTGTCAGCTCTTATGTACGTAGTGGTGCCAATGCCTTGCATGTTCTTTGGAGGCGGATCCACACAATTTTTAATAACTCGAGATGGTGGAGGTTGGATAGATGCAGCAAAGTTCTTGACAGGAGCTTCAGCAGTTGGAAGCATTGCAATCCCTATGATTCTTAGGCATGCTGATCTAATAGAGACGGGAGCCATGGTCATCGAATTGACTTCCTTCTTCATATTTGTCTGTACCGTCTTGTGCTTCCACCGTGCTAGTCTTGATGATGAATGGTAA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_30327.p2 GENE.S_Transcript_30327~~S_Transcript_30327.p2 ORF type:complete len:127 (+),score=18.62,Vps55|PF04133.10|3.7e-33 S_Transcript_30327:169-549(+)
MAMTVEVLAGLAFMFSASILLQILACALYSNWWPMLSALMYVVVPMPCMFFGGGSTQFLITRDGGGWIDAAKFLTGASAVGSIAIPMILRHADLIETGAMVIELTSFFIFVCTVLCFHRASLDDEW*

Click here to download the sequence:
Link to NCBI Protein BLAST