Transcript Information: S_Transcript_30375.p3


Annotated TAIR IDAT1G03910.2
Annotated Gene NameEXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Cactin protein, cactus-binding domain, C-terminal (InterPro:IPR019134), Cactin, central region (InterPro:IPR018816); BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT2G36815.2).
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr1:996432-1000231 | Forward length=716
E-Value1.7E-116
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 110.488653427983
Replicate 211.031394778757
Replicate 311.499588381539
Condition 2: 8 Hour
Replicate 111.79168641065
Replicate 29.4751358944724
Replicate 311.034085819049
Condition 3: 24 Hour
Replicate 111.950436262501
Replicate 29.065524630539
Replicate 39.4953578936908


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_30375.p3 GENE.S_Transcript_30375~~S_Transcript_30375.p3 ORF type:complete len:170 (+),score=30.02,CactinC_cactus|PF09732.5|8.4e-63 S_Transcript_30375:2247-2756(+)
ATGGCTTTAAAACCTGCTCAACCAGATGAGGACTTTGAGCGTAGGGCTGATAAAGTCATGGGAACAATGGACGAGGGTGATGCCGTATTTGGCTCTGGTGCTGAAGTAAACTTGGATTCCCAGGTTTACTGGTGGCATGACAAGTATCGTCCTAGAAAGCCCAAGTACTTTAATCGTGTTCATACTGGCTATGAATGGAACAAGTATAACCAGACGCATTATGACCATGATAACCCTCCTCCCAAGATTGTTCAAGGCTACAAGTTCAACATTTTCTACCCAGATCTTGTTGACAAGACGAAAGCTCCGACATACTTCATCGAGAAAGACGGCGACAGTACAGAGACCTGCATTATTAGGTTCCATGCTGGCCCACCTTACGAGGACATTGCTTTTCGCATTGTGAACAAAGAGTGGGAGTATTCACACAAGAAGGGCTACAAATGCACCTTTGAAAGAGGGATACTGCATGTATACTTTAACTTCAAGCGATATCGTTATCGGAGGTGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_30375.p3 GENE.S_Transcript_30375~~S_Transcript_30375.p3 ORF type:complete len:170 (+),score=30.02,CactinC_cactus|PF09732.5|8.4e-63 S_Transcript_30375:2247-2756(+)
MALKPAQPDEDFERRADKVMGTMDEGDAVFGSGAEVNLDSQVYWWHDKYRPRKPKYFNRVHTGYEWNKYNQTHYDHDNPPPKIVQGYKFNIFYPDLVDKTKAPTYFIEKDGDSTETCIIRFHAGPPYEDIAFRIVNKEWEYSHKKGYKCTFERGILHVYFNFKRYRYRR*

Click here to download the sequence:
Link to NCBI Protein BLAST