Transcript Information: S_Transcript_303833.p1


Annotated TAIR IDAT1G66170.1
Annotated Gene NameRING/FYVE/PHD zinc finger superfamily protein
Annotated Gene Symbol(s)MMD1
Annotation TypeOrtholog
Chromosome Positionchr1:24638793-24641222 | Reverse length=704
E-Value3.1E-179
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 11.1815497377141
Replicate 22.1456412677499
Replicate 31.8715672981244
Condition 2: 8 Hour
Replicate 12.028842630594
Replicate 21.8446133127893
Replicate 32.0279347615733
Condition 3: 24 Hour
Replicate 12.3553679873579
Replicate 21.5811961564893
Replicate 31.8663246388564


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_303833.p1 GENE.S_Transcript_303833~~S_Transcript_303833.p1 ORF type:complete len:473 (+),score=71.24 S_Transcript_303833:689-2107(+)
ATGTCTCTACCCATATTGAAAACCTGCAGGAAGAAGAAGTCCCCCAAACTCTATGGATTCCACACATTCTTTGATCATCCGGGCAACCCCATTAATCCAATTGGACCATTTCGTGATAATATTCGGGCCTTCCTTCGAGAATGTGCTGAGATTGAAGACTACAAAGTCAATTCCATGCCCGTTTGGTGTACTTTGCTTGTCCTTGAAAACAGGGGCATCGTTGTTCCTCTTTACACCTTTGAAGAAAATGTGATGGATTCCCAGAACCCTTTCTGTGATCACTGCCGTTGCGCTGGATGGAGTCATCATTATATGTCAAAAAGGAAGTACCATGTGATCATACCGCTTGATTCTGAGTGGAATAAACCTATCAACAGTGATGTTTTTGAGACTCAGACCCACCTCTTGTATGGGCTCATTCATTGTAATGGCTTCGGCCATCTTCTGTGCATCAATGGGATTGAAGGAGGTTCTACGTATCTTTGTGGAAGAGAGATCATGGATCTATGGGATCGTATCTGCACTAATCTTCATGCAAGAAAGATTATGGTAGGGGATTTGTCAAGAAAGAGTTCAATGGATCTCCGATTGCTTTATGGCATTGCATATGGTCACCCTTGGTTTGGCAGATGGGGATACAAGTTCTCACATGGAAGCTTTGGAGTTCAAGAGCACCATTACCAAAAAGCTGTGGAGGTTCTTAGCTCTCTAGATCTTGATGACCTGGTTTTCATGCTGCCAAAGATAGAACAAAGGCAAGTTATCAAGCATATCATATCTTCCTACCGAGATTTGAGTGAGACTTACCTCATCACACTCAGAGATCTCCTCAGGTTTATGCTCAACCTGAAGTCCCAGACTCCTGCCAGAACTAAAATGGCCTTGGCTGAGGCCTCATTGCCTACCTCCTTACCTTCGAAATACTCGTCCAAAATAACCCTGCAACACAGGAAGTCTCCTGCCAAAGCAAAACCTACAAAGTGCAAAAAATTTGCATCTCTGGCAGCTAACATGGACAGCAGATGGCCGACTAGGAGACTAGAATTTGCAGCTGATATAATTGTTAATGTCTTGAAGGAAAATAAGGAGACCAAACCTTTCCATATTGGAATGACTAGGCAAGAAGTTCGAGATGCTGCTCGACTTCATATTGGAGATACAGGGCTTCTTGATTATGTCCTGAAATCCATGAACAATGTGATTGTCAGAAATTCCATAGTTCGACGAAGAATTAACCCTGTAAATAGGGTTCTGGAGTACACCATTCACCAACTTGGTGAACCTTCACCAAGAGAGCCAAAGCGAGAAAATGCCCCTGTTGAACATGAAACCCTATCACTTACTAAACAACCTGGAGTAGATGTTTATCAAGATGTATACACCTTGTACCTACAGCTACTCTTGGTGCAGTCCATGTGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_303833.p1 GENE.S_Transcript_303833~~S_Transcript_303833.p1 ORF type:complete len:473 (+),score=71.24 S_Transcript_303833:689-2107(+)
MSLPILKTCRKKKSPKLYGFHTFFDHPGNPINPIGPFRDNIRAFLRECAEIEDYKVNSMPVWCTLLVLENRGIVVPLYTFEENVMDSQNPFCDHCRCAGWSHHYMSKRKYHVIIPLDSEWNKPINSDVFETQTHLLYGLIHCNGFGHLLCINGIEGGSTYLCGREIMDLWDRICTNLHARKIMVGDLSRKSSMDLRLLYGIAYGHPWFGRWGYKFSHGSFGVQEHHYQKAVEVLSSLDLDDLVFMLPKIEQRQVIKHIISSYRDLSETYLITLRDLLRFMLNLKSQTPARTKMALAEASLPTSLPSKYSSKITLQHRKSPAKAKPTKCKKFASLAANMDSRWPTRRLEFAADIIVNVLKENKETKPFHIGMTRQEVRDAARLHIGDTGLLDYVLKSMNNVIVRNSIVRRRINPVNRVLEYTIHQLGEPSPREPKRENAPVEHETLSLTKQPGVDVYQDVYTLYLQLLLVQSM*

Click here to download the sequence:
Link to NCBI Protein BLAST