Transcript Information: S_Transcript_304538.p1


Annotated TAIR IDAT1G11290.1
Annotated Gene NamePentatricopeptide repeat (PPR) superfamily protein
Annotated Gene Symbol(s)CRR22
Annotation TypeHomolog
Chromosome Positionchr1:3791454-3793883 | Reverse length=809
E-Value3E-149
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10.59879252779156
Replicate 20.46883427809719
Replicate 30.39190814177651
Condition 2: 8 Hour
Replicate 11.2528666811316
Replicate 21.3982405399829
Replicate 31.172371618274
Condition 3: 24 Hour
Replicate 10.3822854610854
Replicate 20.11331905788174
Replicate 30.25222044405116


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_304538.p1 GENE.S_Transcript_304538~~S_Transcript_304538.p1 ORF type:complete len:800 (+),score=109.53,PPR_2|PF13041.2|0.14,PPR_2|PF13041.2|0.23,PPR_2|PF13041.2|7.1e-07,PPR_2|PF13041.2|18,PPR_2|PF13041.2|8.4e-10,PPR_2|PF13041.2|1.3,PPR_2|PF13041.2|2.6e-05,PPR_2|PF13041.2|3.9,PPR_2|PF13041.2|7.8e-10,PPR_2|PF13041.2|2.8,PPR_2|PF13041.2|1.6e+03,PPR|PF01535.16|0.39,PPR|PF01535.16|0.013,PPR|PF01535.16|5.7e-05,PPR|PF01535.16|1e+04,PPR|PF01535.16|4.7,PPR|PF01535.16|4.2e-06,PPR|PF01535.16|0.023,PPR|PF01535.16|0.078,PPR|PF01535.16|0.24,PPR|PF01535.16|1.9e-06,PPR|PF01535.16|5,PPR|PF01535.16|0.33,PPR|PF01535.16|9.6e+03,DYW_deaminase|PF14432.2|1.1e+02,DYW_deaminase|PF14432.2|2.8e-39,PPR_3|PF13812.2|9.3e+03,PPR_3|PF13812.2|0.24,PPR_3|PF13812.2|1.5,PPR_3|PF13812.2|1.2e+04,PPR_3|PF13812.2|42,PPR_3|PF13812.2|0.017,PPR_3|PF13812.2|3.3,PPR_3|PF13812.2|18,PPR_3|PF13812.2|6.9e+03,PPR_3|PF13812.2|0.27,PPR_3|PF13812.2|0.015,PPR_3|PF13812.2|2.8e+03,PPR_3|PF13812.2|21,PPR_1|PF12854.3|5.9e+02,PPR_1|PF12854.3|2.6e+02,PPR_1|PF12854.3|0.00021,PPR_1|PF12854.3|5.2e+02,PPR_1|PF12854.3|0.018,PPR_1|PF12854.3|1.5e+03,PPR_1|PF12854.3|8.7,PPR_1|PF12854.3|42,PPR_1|PF12854.3|4.2e+03,PPR_1|PF12854.3|1.1,PPR_1|PF12854.3|0.012,PPR_1|PF12854.3|6.1e+02,PPR_1|PF12854.3|0.045,PPR_1|PF12854.3|6e+03,PPR_1|PF12854.3|6.4e+03,PPR_1|PF12854.3|7.9e+02 S_Transcript_304538:317-2716(+)
ATGGCAGCAAGTCTCCTCCCTCCTACACACCAAACATTCCCAAAATCAAATTTTCCCTCCACTTCCAAACTCACCAACCAGAACCCACATAAACAACACCAGGACCCTTCCCATCAATACTTACCAAACAACATTTTTCAACCAAATCATAGCCAAATCACCCTTGATCAAACAAAGCAACTCCATGCCCATATGCTAAGAACCCATTTCCATAACTCTCTCCAAACCCATTATAACTCTCTTGGTGTACCTTTAAGCGCTGTCGCCCGTTACAATTTCCTCATTACTAGTTATAACAAGAATGGCCTGCCAACATGTTCACTAAAAATATATGCTCAAATGAGAGCAACAGACAGTGAAGTAGATGGTTTTACAATTCCTTCTATCCTGAAATCTTGTGCCCAAGTTAGTTGGGTGCAGTTGGGTAGAGAGGTTCATGGGTTTGCATTGAAAAATGGGTTGGGCTCTGATGTTTATGTGGGTAATGCTCTGATTCAGTTGTACAGTGAGTGTTGTTTTCCAGAATCTGCACGCCAACTGTTCGATAAAATGCTTGAGAGGGATGTTGTTTCTTGGAGTACTATGATTAAGACCTATCATAAGCATAGAATGGTTGACGAAGCGCTTGAAGTGATTGGGAAAATGCAATATAAGTTGGTGAAGCCTAGTGAGGTTGCCATGATTAGCATGGTAAATCTTTTGGCAGACATTGGGAATGTCAAGCTGGCTAAACTCATGCATGCCTATGTTATCAAGAACAGTCACAGTGGCTACTTGAGCACTAATTTGATGACTTCTATGTTAGACATGTATGCCAAGTGTGAGAATTTAGCTCTAGCAAGACGGCTCTTTGATGGATTGGGAGAAAAAACTGTTGTTTCTTATACCGCCATGATTGCAGGGTATGTCCGTTGCAATGCATTAAAAGAGGGTGTGAGGATTTTCAAAGAGATGATAGCAGCAGGGATTTTCCCAAACGAAGTTACTCTGTTGAGTTTATTCAAAGAGCTTGGTGTAGTTGAGGCGTTGGATTTGGGTAAGCAGCTACACGCTTATGCTCTGAGGAACGGGTTTGTGATGACTTTGGACCTAGCGACTTCTGTGGTAGACATGTATGGCAAATGTGGTGAAATCAGAAGTGCGCGAGCTGTTTTCAATGGCATGGAGAAAAGAGATATAATGATTTGGACAGCCCTGCTCTCAGCTTATGCACAAGCTTATAGCCTCGATGAGACCATTGATCTCCTCGTGCTAATGAGGAACGATGGGATGAGACCTAACCAAGTAACAATGGTTGCCCTCTTGTCATTTTGTACAGAATCTGGGGCCCTTGATCTAGGCAAGTGGATCCATGCATATATAAACAAGCAAGGGATAGACTTGGATGATGTACTTAGAACCGCTCTCATTGACATGTATGCCAAATGTGGAGACATAGCCAGTGCTTGCAGTCTGTTTGCCGAAACCACAAGCGGGGACATCTGCATGTGGAACTCCATGATAACAGGGTTGGGCATGCATGGGTTTGGTAAGGAAGCTTTCCAGCTCTTCACTGAGATGGAGAAGTTGCACATCAAACCTAATAGTATCACATTTATCGGATTGCTTCACGCTTGTAGCCATGCAAGAATGGTTACAGAAGGGAAAAAGGCTTTTGAAAGCATGATAAATCAGTACAGTTTGGTTCCAAAAGTTGAGCATTATGGTTGCTTAATTGACCTTCTAGCACGAGCTGGACTGCTTCATGAAGCATATGAAAGGATACAAAGCATGCCCATCAAACCTAATACGGTTGTATGGGGTGCTCTGGCTGCTGCTTGCAAGGTTCATAAAAACCATAGTTTGGGAGAATTGGCTACTAAAGCTCTCCTTGAAATAGATCCGGAAAATTGTGGTTATAACATTCTCATGTCCAACATTTATGCCACAACAAATAAATGGACCGAAGTTGCAGGAATTAGAGCGACCATGATAGATGAAGGAATGAAAAAGGAACCAGGATTCAGCTGCATCGAGGTAAATGGCTCAGTTCACAAGTTCACGAGTGGAGATCAGGCGCATCCACAATTCCACGAGATTAATAACATGTTGGGTGAGATGATGAAGACACTTCGGGAGATTGGGTACAAGCCAGACACCTCTGTCGTACTTCTAAACATACTAGAGGAAGAGAGAGAAATGTCACTTAAGTATCACAGTGAGAAAATTGCCATAGCTTTCGGTCTTATTAGCACAGCTCCAGGTAGTCCTATCCGGATTGTGAAGAATCTTCGAGTTTGCGATGATTGTCATAATGCCACCAAACTCCTCTCTAAAATCTATGGGAGGCTGATAATAGTTAGGGATCGCAACCGCTTCCACCATTTCAAGGACGGATTTTGTTCATGTGGTGACTTGTAG

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_304538.p1 GENE.S_Transcript_304538~~S_Transcript_304538.p1 ORF type:complete len:800 (+),score=109.53,PPR_2|PF13041.2|0.14,PPR_2|PF13041.2|0.23,PPR_2|PF13041.2|7.1e-07,PPR_2|PF13041.2|18,PPR_2|PF13041.2|8.4e-10,PPR_2|PF13041.2|1.3,PPR_2|PF13041.2|2.6e-05,PPR_2|PF13041.2|3.9,PPR_2|PF13041.2|7.8e-10,PPR_2|PF13041.2|2.8,PPR_2|PF13041.2|1.6e+03,PPR|PF01535.16|0.39,PPR|PF01535.16|0.013,PPR|PF01535.16|5.7e-05,PPR|PF01535.16|1e+04,PPR|PF01535.16|4.7,PPR|PF01535.16|4.2e-06,PPR|PF01535.16|0.023,PPR|PF01535.16|0.078,PPR|PF01535.16|0.24,PPR|PF01535.16|1.9e-06,PPR|PF01535.16|5,PPR|PF01535.16|0.33,PPR|PF01535.16|9.6e+03,DYW_deaminase|PF14432.2|1.1e+02,DYW_deaminase|PF14432.2|2.8e-39,PPR_3|PF13812.2|9.3e+03,PPR_3|PF13812.2|0.24,PPR_3|PF13812.2|1.5,PPR_3|PF13812.2|1.2e+04,PPR_3|PF13812.2|42,PPR_3|PF13812.2|0.017,PPR_3|PF13812.2|3.3,PPR_3|PF13812.2|18,PPR_3|PF13812.2|6.9e+03,PPR_3|PF13812.2|0.27,PPR_3|PF13812.2|0.015,PPR_3|PF13812.2|2.8e+03,PPR_3|PF13812.2|21,PPR_1|PF12854.3|5.9e+02,PPR_1|PF12854.3|2.6e+02,PPR_1|PF12854.3|0.00021,PPR_1|PF12854.3|5.2e+02,PPR_1|PF12854.3|0.018,PPR_1|PF12854.3|1.5e+03,PPR_1|PF12854.3|8.7,PPR_1|PF12854.3|42,PPR_1|PF12854.3|4.2e+03,PPR_1|PF12854.3|1.1,PPR_1|PF12854.3|0.012,PPR_1|PF12854.3|6.1e+02,PPR_1|PF12854.3|0.045,PPR_1|PF12854.3|6e+03,PPR_1|PF12854.3|6.4e+03,PPR_1|PF12854.3|7.9e+02 S_Transcript_304538:317-2716(+)
MAASLLPPTHQTFPKSNFPSTSKLTNQNPHKQHQDPSHQYLPNNIFQPNHSQITLDQTKQLHAHMLRTHFHNSLQTHYNSLGVPLSAVARYNFLITSYNKNGLPTCSLKIYAQMRATDSEVDGFTIPSILKSCAQVSWVQLGREVHGFALKNGLGSDVYVGNALIQLYSECCFPESARQLFDKMLERDVVSWSTMIKTYHKHRMVDEALEVIGKMQYKLVKPSEVAMISMVNLLADIGNVKLAKLMHAYVIKNSHSGYLSTNLMTSMLDMYAKCENLALARRLFDGLGEKTVVSYTAMIAGYVRCNALKEGVRIFKEMIAAGIFPNEVTLLSLFKELGVVEALDLGKQLHAYALRNGFVMTLDLATSVVDMYGKCGEIRSARAVFNGMEKRDIMIWTALLSAYAQAYSLDETIDLLVLMRNDGMRPNQVTMVALLSFCTESGALDLGKWIHAYINKQGIDLDDVLRTALIDMYAKCGDIASACSLFAETTSGDICMWNSMITGLGMHGFGKEAFQLFTEMEKLHIKPNSITFIGLLHACSHARMVTEGKKAFESMINQYSLVPKVEHYGCLIDLLARAGLLHEAYERIQSMPIKPNTVVWGALAAACKVHKNHSLGELATKALLEIDPENCGYNILMSNIYATTNKWTEVAGIRATMIDEGMKKEPGFSCIEVNGSVHKFTSGDQAHPQFHEINNMLGEMMKTLREIGYKPDTSVVLLNILEEEREMSLKYHSEKIAIAFGLISTAPGSPIRIVKNLRVCDDCHNATKLLSKIYGRLIIVRDRNRFHHFKDGFCSCGDL*

Click here to download the sequence:
Link to NCBI Protein BLAST