Transcript Information: S_Transcript_304729.p2


Annotated TAIR IDAT5G01530.1
Annotated Gene Namelight harvesting complex photosystem II
Annotated Gene Symbol(s)LHCB4.1
Annotation TypeOrtholog
Chromosome Positionchr5:209084-210243 | Forward length=290
E-Value5.5E-177
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10.44061260323147
Replicate 20.073055594561307
Replicate 30.061068662528479
Condition 2: 8 Hour
Replicate 10.35306937611147
Replicate 20
Replicate 30.21174683051306
Condition 3: 24 Hour
Replicate 10.14466810258672
Replicate 20
Replicate 30.2505501099846


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_304729.p2 GENE.S_Transcript_304729~~S_Transcript_304729.p2 ORF type:complete len:302 (+),score=-8.09,Chloroa_b-bind|PF00504.17|5.5e-49 S_Transcript_304729:34-906(+)
ATGGCGTCGTCGGTGGCAGCGGCGGCGAGCACGTTCCTGGGGACGAGGCTGGCGGACCCGGCGCCGCAGAGCGGGAGGATCGTGGCGAGGTTCGGGTTCGGCGGCGGGAAGAAGGCGGCGGCGAAGAAGGCGGCGAGGCCGTCGGCGCCGACGACGGACAGGCCGCTGTGGTTCCCCGGCGCGGTGGCGCCGGACTACCTGGACGGGTCGCTCGTCGGCGACTACGGCTTCGACCCGTTCGGCCTCGGGAAGCCGGCGGAGTACCTGCAGTTCGAGCTGGACTCGCTGGACCAGAACCTGGCCAAGAACAACGCCGGCGAGATCATCGGCACCCGGTTCGAGACCGGCGAGGTGAAGTCCACCCCGTTCCAGCCCTACACCGAGGTGTTCGGCCTCCAGCGCTTCCGCGAGTGCGAGCTCATCCACGGCCGCTGGGCCATGCTCGCCACCCTCGGCGCCCTCTCCGTCGAGTGGCTCACCGGCGTCACCTGGCAAGACGCCGGCAAGGTGGAGCTGGTGGATGGGTCGTCGTACCTGGGGCAGCCGCTGCCGTTCTCGATCTCGACGCTGATCTGGATCGAGGTGCTCGTCATCGGCTACATCGAGTTCCAGCGCAACGCGGAGCTGGACCCGGAGAAGAGGCTGTACCCGGGGGGGTCCTACTTCGACCCGCTCGGGTTGGCGTCGGACCCGGAGAAGAAGGAGCGGCTGCAGCTGGCGGAGATCAAGCACGCCCGCCTCGCCATGGTCGCCTTCCTCGGCTTCGCCGTGCAGGCCGCCGCCACCGGCAAGGGGCCCCTCAACAACTGGGCCACCCACCTCAGCGACCCGCTCCACACCACCATCTTCGACACCTTCTCCTCATCCTCTTAA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_304729.p2 GENE.S_Transcript_304729~~S_Transcript_304729.p2 ORF type:complete len:302 (+),score=-8.09,Chloroa_b-bind|PF00504.17|5.5e-49 S_Transcript_304729:34-906(+)
MASSVAAAASTFLGTRLADPAPQSGRIVARFGFGGGKKAAAKKAARPSAPTTDRPLWFPGAVAPDYLDGSLVGDYGFDPFGLGKPAEYLQFELDSLDQNLAKNNAGEIIGTRFETGEVKSTPFQPYTEVFGLQRFRECELIHGRWAMLATLGALSVEWLTGVTWQDAGKVELVDGSSYLGQPLPFSISTLIWIEVLVIGYIEFQRNAELDPEKRLYPGGSYFDPLGLASDPEKKERLQLAEIKHARLAMVAFLGFAVQAAATGKGPLNNWATHLSDPLHTTIFDTFSSSS*

Click here to download the sequence:
Link to NCBI Protein BLAST