Transcript Information: S_Transcript_304731.p1


Annotated TAIR IDAT5G01530.1
Annotated Gene Namelight harvesting complex photosystem II
Annotated Gene Symbol(s)LHCB4.1
Annotation TypeHomolog
Chromosome Positionchr5:209084-210243 | Forward length=290
E-Value2E-48
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10.20710506797806
Replicate 20.25754229055465
Replicate 30.14352323800467
Condition 2: 8 Hour
Replicate 10
Replicate 20
Replicate 30
Condition 3: 24 Hour
Replicate 10
Replicate 20.35274414904821
Replicate 30.29442075181069


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_304731.p1 GENE.S_Transcript_304731~~S_Transcript_304731.p1 ORF type:internal len:257 (+),score=-2.71,Chloroa_b-bind|PF00504.17|6.6e-26 S_Transcript_304731:1-768(+)
GGAGCTGTTCACGTCGATTTGGTGCCCGTTGTAACCATGCCGCCGTTCGGAACGAAGCAGATCTCCAAGGCGAAGAGCGGCGCGCAGAAGGCCGCCAAGCAGGCGAGCAAGCAGGTCAAGAAGGCCGCGCCCAAGGTGCCGTCGCCGCCCAAGCCGAAGGCCAAGAAGGGCACATCGCCCACAAAGAAGGTCTCCAATGTCGGCAGCCAGCTGCGCAAGCAGGCGAAGTCGGTCGCGAACAGCGCCGGCCAGCGCATGGGCGGTGTAGGCTACCGCAAGTACGAGGGCGACGCGCTGTGGCTGCCCAACACCGAGCGACCAGAGTGGCTCGACGGCTCATTGCCAGGCGACCGAGGGTTTGACCCCCTGGGCCTGGCCAAGCCGAACGAGTACTTGCAATTCGAGGTTGACCAGCTCGATCAGAACCGCGCCAAGAACGTGGCGGGCGGCGTTATCGGCAAGGCGGACATCCGCAAGGAGGAGGTGTCCATCAAGGACCCTGTCTCCCCCTACAATGAGGTCTTCAACCTGGACCGCCTGCGCGAGTGCGAGCTCATCCACGGCCGCTGGGCGATGCTTGCCACGCTCGGCTGCCTGTGGGCGGAGCTCCAGACGGGCGTGAGCTGGGTCGAGGCGGGCAAGGTCGAGCTCGACGGCGCGCAGTACGCAAACCAGTCGCTGCCGTTCACCATCGGCCAGCTGTGCTGGATCGAGGCAATTCTGGTTGGTGGCGCGGAGATCTACCGCAACTCTGAGACTGACACATCC

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_304731.p1 GENE.S_Transcript_304731~~S_Transcript_304731.p1 ORF type:internal len:257 (+),score=-2.71,Chloroa_b-bind|PF00504.17|6.6e-26 S_Transcript_304731:1-768(+)
GAVHVDLVPVVTMPPFGTKQISKAKSGAQKAAKQASKQVKKAAPKVPSPPKPKAKKGTSPTKKVSNVGSQLRKQAKSVANSAGQRMGGVGYRKYEGDALWLPNTERPEWLDGSLPGDRGFDPLGLAKPNEYLQFEVDQLDQNRAKNVAGGVIGKADIRKEEVSIKDPVSPYNEVFNLDRLRECELIHGRWAMLATLGCLWAELQTGVSWVEAGKVELDGAQYANQSLPFTIGQLCWIEAILVGGAEIYRNSETDTS

Click here to download the sequence:
Link to NCBI Protein BLAST