Transcript Information: S_Transcript_304855.p1


Annotated TAIR IDAT1G73220.1
Annotated Gene Nameorganic cation/carnitine transporter1
Annotated Gene Symbol(s)AtOCT1, 1-Oct
Annotation TypeHomolog
Chromosome Positionchr1:27538387-27540109 | Forward length=539
E-Value2E-48
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 16.5215027779279
Replicate 23.7681497016548
Replicate 33.2411739156823
Condition 2: 8 Hour
Replicate 11.4252117291153
Replicate 20.8306379445443
Replicate 31.6883839687114
Condition 3: 24 Hour
Replicate 13.3524326148932
Replicate 24.2073907629358
Replicate 32.6220937252843


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_304855.p1 GENE.S_Transcript_304855~~S_Transcript_304855.p1 ORF type:complete len:404 (+),score=70.61,Sugar_tr|PF00083.20|7.5e+02,Sugar_tr|PF00083.20|1.4e-07 S_Transcript_304855:41-1213(+)
ATGGCAGAAGAAAACAGCCATGAGCTGGCCTCACAATACCAAGAGAAAATGATGAACGAGTCAGTAACCCAACAATTAGAAACAGAGTCCCCTCCATTAGAACTAGAAGCAGGAATGACAGTAGATGAAGTGATAGAAAAGCATGTTGGGTCATTAGGTTGGTCTCAGCTTATACAAGTGGTTTTGGTGTCATTTGCATGGATATTTGATGCTCAAGGCACCTTAGTTACCATTTTTAGCGACGCCGAACCAGAGTGGAGGTGTAAGGCGGGGAACTTTGGTAGTTCATTATATGATCAAGTGTGTGGTCAGGGGAATTATCATAGAAGTCATAAAGGGAGTGCGGTTTGTGGGCTTCCACCAGGGAGTTGGGAGTGGGTTGGTGGCCATAAGAGTTCCACTATTGCCGAATGGGGACTCGTTTGCAACCACAAATTCCTTGCTGCCGTTCCTGCTTCTTGCTTCTTTATTGGTTCTCTTATTGGAAGCAGAAATATGATTAATGGTTCCAACATGAGGCTTTGGGAGTGTAAATGGGCAGTGTGTAGGATGTGCAAAGCAATGGTGGCTGGTTTTGGAGTTGGCTTTGTATACTATGGGATCCAATTGAATGTGGAGAACTTAAACTTTTCAAAGTATATGACTGTTGGAATCAATGGTTTAATGGAAATCCCTGCAGTTCTGATAGGAGGCTTACTAATGAGTAACACAAATCGTCGAGTGTTATTTTCATTATCATCTTACACAGCTGGGGCCTTATGTCTACTTTGCATATTCTTTGCAAAAAGTGTTAGTAGTAAAGTTCACACAGCAAACACAAAATGGGGTAGTTGGATTCAGGTGGGGATTGAAGGGATTGGGTTCATGGCAGCTTCTACAGCCTTTGATGTTTTGTATATTTACTGTGTTGAATTATTCCCTACAAATGTGAGGAACTTTGCTGTGTCTCTGCTACGTCAAGCTTTAATGCTTGGGGCTTCTGTGGCGCCATTGTTGGTGGTTGTGGGCCGTTTGAGACCAGCTTTGTCTTTCTTGGTATTCGGGGGATTGGGTATTTTAAGTGGGCTTATAAGCTTGTGGCTTCCAGAGACTAGAAATGCTCCTCTTTATGAGACTTTGGAGCAACAGCAAAAGGAGGAGAAGTTGGGTCATGCTTCTTCTTGTGGTGCATAA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_304855.p1 GENE.S_Transcript_304855~~S_Transcript_304855.p1 ORF type:complete len:404 (+),score=70.61,Sugar_tr|PF00083.20|7.5e+02,Sugar_tr|PF00083.20|1.4e-07 S_Transcript_304855:41-1213(+)
MAEENSHELASQYQEKMMNESVTQQLETESPPLELEAGMTVDEVIEKHVGSLGWSQLIQVVLVSFAWIFDAQGTLVTIFSDAEPEWRCKAGNFGSSLYDQVCGQGNYHRSHKGSAVCGLPPGSWEWVGGHKSSTIAEWGLVCNHKFLAAVPASCFFIGSLIGSRNMINGSNMRLWECKWAVCRMCKAMVAGFGVGFVYYGIQLNVENLNFSKYMTVGINGLMEIPAVLIGGLLMSNTNRRVLFSLSSYTAGALCLLCIFFAKSVSSKVHTANTKWGSWIQVGIEGIGFMAASTAFDVLYIYCVELFPTNVRNFAVSLLRQALMLGASVAPLLVVVGRLRPALSFLVFGGLGILSGLISLWLPETRNAPLYETLEQQQKEEKLGHASSCGA*

Click here to download the sequence:
Link to NCBI Protein BLAST