Transcript Information: S_Transcript_30497.p1


Annotated TAIR IDAT3G11710.1
Annotated Gene Namelysyl-tRNA synthetase 1
Annotated Gene Symbol(s)ATKRS-1
Annotation TypeOrtholog
Chromosome Positionchr3:3702359-3705613 | Reverse length=626
E-Value0
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 164.431476674647
Replicate 259.502674867237
Replicate 360.005074338987
Condition 2: 8 Hour
Replicate 157.786025755676
Replicate 255.911781209652
Replicate 353.102637893111
Condition 3: 24 Hour
Replicate 148.846135014056
Replicate 247.351823229689
Replicate 348.151175682494


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_30497.p1 GENE.S_Transcript_30497~~S_Transcript_30497.p1 ORF type:complete len:627 (+),score=153.78,tRNA-synt_2|PF00152.16|2.5e+03,tRNA-synt_2|PF00152.16|8.2e-79,tRNA_anti-codon|PF01336.21|1.5e-13,tRNA-synt_2d|PF01409.16|0.0099,tRNA-synt_2d|PF01409.16|0.036 S_Transcript_30497:279-2159(+)
ATGGCGAATCCGGCTGACGAAGCCGCCAAATCTGTCGCCAATTTGTCCATGGATTCCAACCCTAACGCTCCTCCTTCTTCCGACTCCGAAACTCTCAGCAAGAATGCGTTGAAGAAGCAGTTGAAGAACAAGCAGAGAGAAGAAGAACGACGTCGTAAGGAAGAGGAGAAAGCTGCTAAGCAGGCGGCTAATGCATCATCACAAGGTCAGAAGTCCCAATTGGCTGATGACGAGGATATGGATCCCACTCAATACTTTGAAAACAGGGTAAAATCCCTAGCTGCACAGAAGGTGGCTGGAGTCAACCCTTATCCACACAAATTCTTTGTTACAATGCAAATTACCGAATACATTCAGAAGTATGGAGTATTGAACAATGCGGAGCATCTTGAAGATGTTCAAGTATCATTAGCTGGGAGGATCATGAGTAAGCGTGCGTCTTCTTCAAAGCTTTTCTTTTATGATTTGCATTGCGGTGGTGGCAAAGTGCAAGTGATGGCCGATGCTAGGTCTTCTGAGCTTGATGAAGCTGAATTTTCAAGGTTCCATGCCAGTGTGAAACGTGGTGACATTGTTGGTGTAACTGGATTCCCAGGAAAAACCAAAAGAGGAGAGCTGAGTATTTTCCCAAAGTCTTTTATTTTATTGTCTCATTGTCTCCATATGATGCCAAGACAGAAGATTGTTGCTGCTTCAGAGAATGTTAAGAAAGGTGAGGCTTGGGTTCCTGGAAGTCCAAGGAATCCTGATATGTACATCCTGAAGGATCAGGAAACTCGTTATCGACAACGTTACTTGGATTTGATGTTGAACAGCGAAGTTAGGGAGATATTCAAGACACGATCTAGGATTATCTCATATGTTAGGAGATTCCTTGACAACCTGGATTTCTTAGAGGTTGAAACCCCTATGATGAACATGATTGCTGGAGGTGCAGCTGCACGTCCATTTGTTACTCATCATAATGAGCTCAACATGAGGCTATTCATGCGTATTGCTCCAGAACTGTATCTGAAGGAGCTAGTAGTTGGCGGGCTAGATCGTGTATATGAGATTGGAAAGCAATTTAGAAATGAGGGTATTGACCTGACACATAATCCTGAGTTCACCACATGTGAATTCTATATGGCATTTGCAGATTACAATGATTTAATGGAGCTGACTGAGCAGATGTTGAGTGGGATGGTGAAGGAACTGACTGGTGGTTATGTCATCAAGTACCATTCAAATGGTCTAGATAAGGATCCAATTGAGATAGATTTTACTCCTCCATTCAGGAGGATTGACATGATAGAAGAGTTGGAAAAAATGGCAAACCTCAGCATCCCAAAGGATTTGGCTAGCGAAGAAGCAAACAAATATTTGCTAGATGCGTGTCTGAAGTATGATGTTAAATGCCCACCCCCACAAACAACAACTCGTTTGTTGGATAAATTGGTGGGACACTTTTTGGAGGAGACTTGCGTCAATCCATCTTTCATAATAAATCATCCAGAAATAATGAGTCCCTTAGCCAAGTGGCATAGGTCAAGGCCAGGCCTTACTGAACGTTTTGAGTTGTTTGTTAACAAGCACGAGCTTTGCAATGCATACACCGAATTGAATGATCCTGTAGTGCAGCGGCAGCGATTTGCTGAACAACTGAAGGATAGACAATCAGGTGACGATGAAGCAATGGCTTTGGATGAGACATTTTGTACTGCCCTTGAGTATGGCCTGCCACCCACCGGTGGTTGGGGATTGGGTATTGATCGACTTGCAATGATTCTAACAGATTCCCAAAACATAAAGGAAGTCTTGCTCTTCCCAGCAATGAAGCCTCAGGATGAGCCGCAAGCTAAAGCTCCAGCTCCAGCTCTTGCTTCAGCTTCTGGGTATTGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_30497.p1 GENE.S_Transcript_30497~~S_Transcript_30497.p1 ORF type:complete len:627 (+),score=153.78,tRNA-synt_2|PF00152.16|2.5e+03,tRNA-synt_2|PF00152.16|8.2e-79,tRNA_anti-codon|PF01336.21|1.5e-13,tRNA-synt_2d|PF01409.16|0.0099,tRNA-synt_2d|PF01409.16|0.036 S_Transcript_30497:279-2159(+)
MANPADEAAKSVANLSMDSNPNAPPSSDSETLSKNALKKQLKNKQREEERRRKEEEKAAKQAANASSQGQKSQLADDEDMDPTQYFENRVKSLAAQKVAGVNPYPHKFFVTMQITEYIQKYGVLNNAEHLEDVQVSLAGRIMSKRASSSKLFFYDLHCGGGKVQVMADARSSELDEAEFSRFHASVKRGDIVGVTGFPGKTKRGELSIFPKSFILLSHCLHMMPRQKIVAASENVKKGEAWVPGSPRNPDMYILKDQETRYRQRYLDLMLNSEVREIFKTRSRIISYVRRFLDNLDFLEVETPMMNMIAGGAAARPFVTHHNELNMRLFMRIAPELYLKELVVGGLDRVYEIGKQFRNEGIDLTHNPEFTTCEFYMAFADYNDLMELTEQMLSGMVKELTGGYVIKYHSNGLDKDPIEIDFTPPFRRIDMIEELEKMANLSIPKDLASEEANKYLLDACLKYDVKCPPPQTTTRLLDKLVGHFLEETCVNPSFIINHPEIMSPLAKWHRSRPGLTERFELFVNKHELCNAYTELNDPVVQRQRFAEQLKDRQSGDDEAMALDETFCTALEYGLPPTGGWGLGIDRLAMILTDSQNIKEVLLFPAMKPQDEPQAKAPAPALASASGY*

Click here to download the sequence:
Link to NCBI Protein BLAST