Transcript Information: S_Transcript_30511.p1


Annotated TAIR IDAT3G48990.1
Annotated Gene NameAMP-dependent synthetase and ligase family protein
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr3:18159031-18161294 | Reverse length=514
E-Value2.6E-14
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 134.339356432491
Replicate 230.840458521257
Replicate 333.514219334715
Condition 2: 8 Hour
Replicate 14.1274949000903
Replicate 23.6083626838269
Replicate 33.4380399362873
Condition 3: 24 Hour
Replicate 150.501612370729
Replicate 239.722594483276
Replicate 345.833607574888


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_30511.p1 GENE.S_Transcript_30511~~S_Transcript_30511.p1 ORF type:5prime_partial len:93 (+),score=-0.82,AMP-binding|PF00501.24|1.7e-07,AMP-binding|PF00501.24|1.4e+03 S_Transcript_30511:1-279(+)
TTCCATACCGGTGATGTTGGTTATTTTGATGAGGAGGGGTACTTGCATTTGGTTGGCCGTATTAAGGAGCTCATCAACCGTGGAGGTACTTTTCTGAACCGTCTTCTTTCACAAAAATATCTGTACATGTGTCTAATCATAAACTTAATCCAGTATTATTTCATTACTCGTCTGATCTTATGCTTCCATTTGGTTTATTGCTCATATGTTTGTTTTTTGTTGTTTAGTGTTGGTATGCGAAATTTATATGGTGCACCATGCTCCCAATGGTATTATTAG

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_30511.p1 GENE.S_Transcript_30511~~S_Transcript_30511.p1 ORF type:5prime_partial len:93 (+),score=-0.82,AMP-binding|PF00501.24|1.7e-07,AMP-binding|PF00501.24|1.4e+03 S_Transcript_30511:1-279(+)
FHTGDVGYFDEEGYLHLVGRIKELINRGGTFLNRLLSQKYLYMCLIINLIQYYFITRLILCFHLVYCSYVCFLLFSVGMRNLYGAPCSQWYY*

Click here to download the sequence:
Link to NCBI Protein BLAST