Transcript Information: S_Transcript_305461.p1


Annotated TAIR IDAT1G72390.1
Annotated Gene NameCONTAINS InterPro DOMAIN/s: Spt20 family (InterPro:IPR021950); Has 8778 Blast hits to 7244 proteins in 477 species: Archae - 6; Bacteria - 326; Metazoa - 4198; Fungi - 1506; Plants - 923; Viruses - 22; Other Eukaryotes - 1797 (source: NCBI BLink).
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr1:27245455-27251218 | Forward length=1325
E-Value5E-106
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 11.2867824773054
Replicate 21.9880755425453
Replicate 32.3104086961873
Condition 2: 8 Hour
Replicate 11.6872836294875
Replicate 22.0159248224809
Replicate 32.0144647187125
Condition 3: 24 Hour
Replicate 12.6405903120498
Replicate 22.5901498944397
Replicate 32.6053540374516


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_305461.p1 GENE.S_Transcript_305461~~S_Transcript_305461.p1 ORF type:3prime_partial len:455 (-),score=118.68 S_Transcript_305461:3-1364(-)
ATGTCCTTGGAGAATGTTGTGAAGGATATTCCATTGATAGCTGAGGATTCTTGGACTTATGGAGACCTGATGGAAGTAGAGTCTCGAATATTGAAAGCTCTACAACCAAAGCTGTGTCTTGATCCTGCTCCCAGATTGGAAAGACTTTGTGAGAACCCAGTTTCCTCTAAGCTTAATTTGGGACTGGTCGGAGCACGAAAGAGGAGATTGAGACAAATGCCAGAAATTAATGTCACGCCAAATAATCAGCCACATGGAAAGAAAATTTGTATAGACCGGGCACCCGAAAGCTCAAGCTACAGAATTGGAGAATTAGGGCCCTCATCTGGTGACATGATGTCACAGCATGTCCAAAATAATGTAGCTGCCCAAGGGTCAGCGAATCAAAGAACTGTGCACGATCATCTGCAAGGTCCCTCCAACTTACCAGGAGTTTCACTTGCTGGTCAGGATATGCCAATTTCATACACTGACAATGTGAATTCTACTAACCTTATAAAGATGGAAAGTCAGGAAGGGCAGTTGCCTCCTTATTCTACTCTAAATAAGAGGGCAAGGCTTGTATCTGTTGGTCCTGATGGTGTTCAGCAGCAGCAAAATGGGTCTTCTGTCAATGGCCTTCAAGCACCAGATGTGCAGTGGAGGAATCCATTGGTGCAACAGCAACAGAATGCAAGAGCAATGCAGTTTGCTAATCCTAGCATGCAGAAGTATCCTCAACTAGTTGGTGATGGGGTTTCCAATCATGATAGCATAAAATTAGAGAAAGCGGATGGCAATCTGGCTAAAACTGATATCCAACAGCCGAACTGGAGTAATTTTGGCCAGCAAATTGAAAAAGATCCAAGAAAGGAGGATCAATTTTCCAAGAGAAAATCAATTCAAAGTCCACGTCTTTCCGCTGGGGCTGTGGCTCAGTCTCCTTTATCAGCAAAGTCTGGAGAGATCTCTTGTGGTTCAATGGGGGCACAGTATGGGGCAGTTTCTTCTGCTGCTCCTCTTGGGCAATTGCAAAGGGACAAATCAGTTGTGACATCAATTCCTGCAGATCGGGCTACATCCATGACGTCAAGTGCCAATGATTCTATGCAACCACAGCATCAGGCCCAACTCACAACAAAGAGAAGGTCTAATTCCTTTTCCAAGAACCCAGGAATAAGCGCTGTGGGGTCTCCTGCTAGTGTCAACACTATGGGTGGCCCGATGAATGCATCTAGCCCTTCAGTTAGCACCCCACAGTTACCTGACCAAAGCATGATTGAGAGGTTTGCCAAGCTTGAGGTGGTAGCTATGAGGCATCAGTTGAACTGTAAAAAGAACAAGGTTGACGAATTTGCTAGAAAGCCACGATTATTTTCTGCA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_305461.p1 GENE.S_Transcript_305461~~S_Transcript_305461.p1 ORF type:3prime_partial len:455 (-),score=118.68 S_Transcript_305461:3-1364(-)
MSLENVVKDIPLIAEDSWTYGDLMEVESRILKALQPKLCLDPAPRLERLCENPVSSKLNLGLVGARKRRLRQMPEINVTPNNQPHGKKICIDRAPESSSYRIGELGPSSGDMMSQHVQNNVAAQGSANQRTVHDHLQGPSNLPGVSLAGQDMPISYTDNVNSTNLIKMESQEGQLPPYSTLNKRARLVSVGPDGVQQQQNGSSVNGLQAPDVQWRNPLVQQQQNARAMQFANPSMQKYPQLVGDGVSNHDSIKLEKADGNLAKTDIQQPNWSNFGQQIEKDPRKEDQFSKRKSIQSPRLSAGAVAQSPLSAKSGEISCGSMGAQYGAVSSAAPLGQLQRDKSVVTSIPADRATSMTSSANDSMQPQHQAQLTTKRRSNSFSKNPGISAVGSPASVNTMGGPMNASSPSVSTPQLPDQSMIERFAKLEVVAMRHQLNCKKNKVDEFARKPRLFSA

Click here to download the sequence:
Link to NCBI Protein BLAST