Transcript Information: S_Transcript_30552.p1


Annotated TAIR IDAT1G80500.1
Annotated Gene NameSNARE-like superfamily protein
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr1:30271195-30272431 | Forward length=135
E-Value6.5E-84
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 113.502184450202
Replicate 210.869168384952
Replicate 311.933535112918
Condition 2: 8 Hour
Replicate 119.130129549193
Replicate 212.995412077488
Replicate 316.457088224434
Condition 3: 24 Hour
Replicate 19.6374485987916
Replicate 27.9989923210638
Replicate 310.756460113947


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_30552.p1 GENE.S_Transcript_30552~~S_Transcript_30552.p1 ORF type:complete len:136 (+),score=16.70,Sedlin_N|PF04628.9|6.4e-42 S_Transcript_30552:423-830(+)
ATGGCGAGCACGGCTTGTTTTATGATCGTCAGTCGCACCGATATTCCCATTTACGAAGCTGAGCTTGGTTCTGCTTTGAAAAAAGAAGATGATGCACAGCAGCACCAGTTCATACTACATGCTGCATTGGACATATTCCAGGACCTTGCTTGGACAACCAGCGCAATGTTCTTGAAAGCAATAGACAGATTCAACGATCTGGTGGTGTCTGTATATGTTACTGCTGGTCATACAAGATTCATGCTTCTCCATGACTCACGTAATGAGGATGGTGTGAGAAACTTCTTTCAAGAGGTTCATGAGTTTTATATCAAGACTCTTCTCAATCCTCTTTATTTACCTGGCTCTCGCATCGCATCATCACATTTCGATACAAAAGTACGGGCACTAGCAAGAAAATACCTCTGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_30552.p1 GENE.S_Transcript_30552~~S_Transcript_30552.p1 ORF type:complete len:136 (+),score=16.70,Sedlin_N|PF04628.9|6.4e-42 S_Transcript_30552:423-830(+)
MASTACFMIVSRTDIPIYEAELGSALKKEDDAQQHQFILHAALDIFQDLAWTTSAMFLKAIDRFNDLVVSVYVTAGHTRFMLLHDSRNEDGVRNFFQEVHEFYIKTLLNPLYLPGSRIASSHFDTKVRALARKYL*

Click here to download the sequence:
Link to NCBI Protein BLAST