Transcript Information: S_Transcript_30555.p1


Annotated TAIR IDAT2G41550.1
Annotated Gene NameRho termination factor
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr2:17329086-17330830 | Reverse length=475
E-Value0.0002
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 12.2758063883488
Replicate 22.3872477357171
Replicate 33.4761177958619
Condition 2: 8 Hour
Replicate 13.4239719182831
Replicate 23.5919896594325
Replicate 32.9016337053901
Condition 3: 24 Hour
Replicate 13.8123705917267
Replicate 22.2149623879153
Replicate 34.0496127142595


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_30555.p1 GENE.S_Transcript_30555~~S_Transcript_30555.p1 ORF type:3prime_partial len:573 (+),score=144.74 S_Transcript_30555:170-1717(+)
ATGGCGGACTTCTTGTTATCTTCTAACAACCTCCGCCATTCTCTCTCTTTCAACCCCTCTCGCCACTTCCCTCTCTCTCCTCCTCACTCCAATCTCTCCTTCATTCGCTTCATCTCTTTCAGGCGCACCCGACTCTCTCCCTCCTCTCTCCTCACCAAGCTCTCTTCCGATTCTTCTCCGGTCGATATCATCTCCACTACCGAGCTCCCTGACGGTAGCATTGTGTTCAAATTCGGCGATGCAAGTGAAATACCTCAAATCGAAGAACCGGCGAATACTTCTGATGGAGAAGTTGATGTTAATGACTCCAAAATCATCGTCGTAGGGATTTCAAATGGTGAACATGATGATGTTAGTACTGCTGAAGATGACGTCAGCGATGATGCAAAAAAGGAGGTTCTAGAAGCTTCTGATACTGAACATGAAGCCAGTGAAGCGACATCGGAGCTGCTGGTAGAGAAATTAGAGAGCGAAAGCGAAGTGAAATTGGAGAGGGAAAGTGTCACTGACGAAGAGCTTCCGGAATTTGATGAAAATTCAGTAGATAAGGAAACAGAATTACAGGAAACTGCACCGAAAATTGAATTATCAGGTTTAAGTGGTGAAACAGAAGAAAGTTCAAGTAATTCTGTTGATAATTTGCAGTCTATTGATCAACTGAATGGAGCTTCTAATTGTACTGAAGATGAAGAGGATCAGGATTCGGTTTCAAAACCGGAAACAGAGAATTCTGATGATTCTTTAAATGGGGTCGAAGTAGGAGAGCAAGGCGTTGAAGTTGTTGCAGCTGTTATAATTTCTGATTCTTCCACTGGTTTGAAAGCCGAGAATTCGGAGGAGGAGATCAGCCATGGCGAGGCCGTGGCTGTACTATCCACTTCTGAGCTTGAGACTGCTGGGGTCAGTTCACACGTTGATGATTCAGAGACGACACTGTCGTCGGAAACTGGTGAGCTTGACAGTAATGGGAAGCATATGGTGACTGAAGGCATTGATATTGACAGTAAGCAATCATGTTCACAGTCATTAGAGAGTATTGAACTTGATATTAATGCGAATCAAGTGGTTACTGGAGACAATGACAGCAATGTGAAGCATGTGGTGACTGAAGACAAAGGCAGTCGCGAACCCCTTGAAATTGAGAAGAATTCGCTTGTTGAAGCTTCGGGTGTGGCAGTGTCTTTGGAGCATAGTGAACTTGACAGTGATGTGAAGAATGTTGTGAGTGAAGTCAATGATTCTGTTGAACAGCCTTCCCAATCAGAAGCAGAACCAATGCTTGTCGGAGAAGGATCGAATAATTCAGTAGATGATGTTGTAGAGGTGGAATTGACTTCAGAGACCAGCTTGGTGAATGATGATGCCCCTTCCACCCTTGCACAACATGATGATGATTCAAGTGCTCGTGATATTTTAGAAGTCGCTTCTTCTGAAGCATCAGGAATGCCTTTGGCAGAAATTAATCTTGAAAGCATTAATGACGTGGAAATTTCAACACCGACACTTTCTCTGTCATCAGCTGCTGCTTCATTACCTCATCAATCAGAG

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_30555.p1 GENE.S_Transcript_30555~~S_Transcript_30555.p1 ORF type:3prime_partial len:573 (+),score=144.74 S_Transcript_30555:170-1717(+)
MADFLLSSNNLRHSLSFNPSRHFPLSPPHSNLSFIRFISFRRTRLSPSSLLTKLSSDSSPVDIISTTELPDGSIVFKFGDASEIPQIEEPANTSDGEVDVNDSKIIVVGISNGEHDDVSTAEDDVSDDAKKEVLEASDTEHEASEATSELLVEKLESESEVKLERESVTDEELPEFDENSVDKETELQETAPKIELSGLSGETEESSSNSVDNLQSIDQLNGASNCTEDEEDQDSVSKPETENSDDSLNGVEVGEQGVEVVAAVIISDSSTGLKAENSEEEISHGEAVAVLSTSELETAGVSSHVDDSETTLSSETGELDSNGKHMVTEGIDIDSKQSCSQSLESIELDINANQVVTGDNDSNVKHVVTEDKGSREPLEIEKNSLVEASGVAVSLEHSELDSDVKNVVSEVNDSVEQPSQSEAEPMLVGEGSNNSVDDVVEVELTSETSLVNDDAPSTLAQHDDDSSARDILEVASSEASGMPLAEINLESINDVEISTPTLSLSSAAASLPHQSE

Click here to download the sequence:
Link to NCBI Protein BLAST