Transcript Information: S_Transcript_305722.p2


Annotated TAIR IDAT5G16486.1
Annotated Gene NameRNA-directed DNA polymerase (reverse transcriptase)-related family protein
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr5:5383597-5384226 | Reverse length=209
E-Value4E-09
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 11.0015645626143
Replicate 20.94893718526945
Replicate 30.79323596058497
Condition 2: 8 Hour
Replicate 11.1465263611362
Replicate 20.60139378063781
Replicate 31.3752159745149
Condition 3: 24 Hour
Replicate 10.70467366098691
Replicate 20.85293914534641
Replicate 30.40680716782445


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_305722.p2 GENE.S_Transcript_305722~~S_Transcript_305722.p2 ORF type:complete len:186 (+),score=29.25,zf-RVT|PF13966.2|1.6e+04,zf-RVT|PF13966.2|1.2e-14 S_Transcript_305722:3799-4356(+)
ATGGTTTTCATGGCTTGGAGGAGAATGTGTCAGGAGAAGAGATATGGTGGATTTCATATCAAGGAGGTACTAAGTTGGAATAAAAGTCTCATTATAAAATGGTTTTTCAAAATATTTTGCAGATCAAACTCCTTTTGGGAACGATGGATTCATGCTTACTACCTAAAAGGAAAGGATATTTGGCATATTAAACCCAAGCAAGGAGATTCTTGGGCTTGGAGGTGCATTTTGAAGGTCAGGGATGATTTTATAAATGTTGTAGGTGGATTACAGGAAGCTATTGCTATCTTTCAGAGCTGGACTTCTACTAATTCCATTGCAAAAGTGGCTTATGAACTGTTTAAGGGGCAGTGCATGAAGGTCTCATGGTTTAAGACTATTTGGGACTCTGTTAATCTACTCAAGCATTCCATAATTGCAGTTCTGGCTATTCAGAATGCTCTACCAACTGTTGATAACATTGTGTCAAGAGGGATGCAGTGGATCAACAGGTGCATTCTCTGCAAAAAGGAAGCTGAATCTAGGGATGACCTATTCTTCCATTGTGATTTTGCATAA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_305722.p2 GENE.S_Transcript_305722~~S_Transcript_305722.p2 ORF type:complete len:186 (+),score=29.25,zf-RVT|PF13966.2|1.6e+04,zf-RVT|PF13966.2|1.2e-14 S_Transcript_305722:3799-4356(+)
MVFMAWRRMCQEKRYGGFHIKEVLSWNKSLIIKWFFKIFCRSNSFWERWIHAYYLKGKDIWHIKPKQGDSWAWRCILKVRDDFINVVGGLQEAIAIFQSWTSTNSIAKVAYELFKGQCMKVSWFKTIWDSVNLLKHSIIAVLAIQNALPTVDNIVSRGMQWINRCILCKKEAESRDDLFFHCDFA*

Click here to download the sequence:
Link to NCBI Protein BLAST