Transcript Information: S_Transcript_305921.p1


Annotated TAIR IDAT1G79080.1
Annotated Gene NamePentatricopeptide repeat (PPR) superfamily protein
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr1:29747102-29748832 | Reverse length=576
E-Value6.8E-192
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 13.4274319772581
Replicate 23.5657033628307
Replicate 33.2600796107375
Condition 2: 8 Hour
Replicate 12.6387477917665
Replicate 23.2201903345061
Replicate 32.422255409657
Condition 3: 24 Hour
Replicate 13.3649946791067
Replicate 23.8345337768062
Replicate 32.7387573470202


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_305921.p1 GENE.S_Transcript_305921~~S_Transcript_305921.p1 ORF type:internal len:396 (-),score=63.98,PPR_2|PF13041.2|1.7e-07,PPR_2|PF13041.2|1.7e-10,PPR_2|PF13041.2|1.2e-11,PPR_2|PF13041.2|7.3e-13,PPR_2|PF13041.2|5e-16,PPR_2|PF13041.2|2.4e-15,PPR_2|PF13041.2|5e-10,PPR_2|PF13041.2|6.2e-10,PPR_2|PF13041.2|1.8e+02,PPR_2|PF13041.2|5.4e-10,PPR_2|PF13041.2|0.0017,PPR_1|PF12854.3|29,PPR_1|PF12854.3|1e-08,PPR_1|PF12854.3|2.4e-07,PPR_1|PF12854.3|0.00071,PPR_1|PF12854.3|5.6e-10,PPR_1|PF12854.3|2.1e-12,PPR_1|PF12854.3|9e-09,PPR_1|PF12854.3|1.1e-07,PPR_1|PF12854.3|0.26,PPR_1|PF12854.3|15,PPR_1|PF12854.3|3.1e-09,PPR|PF01535.16|0.26,PPR|PF01535.16|0.001,PPR|PF01535.16|0.0002,PPR|PF01535.16|0.098,PPR|PF01535.16|1.6e-06,PPR|PF01535.16|2.7e-06,PPR|PF01535.16|1.1e-07,PPR|PF01535.16|0.0085,PPR|PF01535.16|1.8e+02,PPR|PF01535.16|0.58,PPR|PF01535.16|5.4e-06,PPR_3|PF13812.2|25,PPR_3|PF13812.2|0.02,PPR_3|PF13812.2|0.0087,PPR_3|PF13812.2|5.9,PPR_3|PF13812.2|0.063,PPR_3|PF13812.2|0.062,PPR_3|PF13812.2|5e-05,PPR_3|PF13812.2|0.01,PPR_3|PF13812.2|4.6e+03,PPR_3|PF13812.2|57,PPR_3|PF13812.2|0.072 S_Transcript_305921:3-1187(-)
CCGGATAAGAGTCAGGCAACTCAGCTTTTGTATGATCTTTGTAAGCTGAGTAAGTTTCGGAAAGCAATTCGAGTGATGGAGATGATGGTAAGCTCAGGTGTGAAGCCAGATGCTACATCCTATACATTCCTTGTTAACCATTTGTGTAAGAGAGGGAATGTTGGGTATGCAATGCAATTGGTTGAGAAGATGGAAGAGTATGGCTACCCAACCAATACAGTTACCTACAATTCACTTGTTAAAGGGCTTTGTATGATTGGGAACTTGAATAAGAGTCTGCAGCTTTTGGAGCAATTGACAAAGAAACGGCTTGAGCCTAATGTTTTTACTTACACATTCTTGCTGGAGGCTGCATATAAAGAAAGAGGCGTCGATGAAGCAATGAGGTTACTTGATGAGATAATTGCCAAAGGTGGGAAACCCAATTTGGTAAGCTACAATGTGCTCTTAACAGGTCTGTGTAAGGAAGGGCGAACGCAGGAGGCAATCAGCCTATTTAGAAACTTGCCCTTGAAAGGATTTTATCCGAATGTGGTGACTTACAATATTTTGCTGAGGACTTTGTGCTGTGAAGGACGGTGGAAAGAGGCATACGAGCTTCTGGGTGAAATGGACAATGAAGAACGAGCCCCATCTATTGTTACCTACAACATCTTGATTAGTTCACTGGCTCTCCATGGTCAAATTCATCATGCCTTTGAGGTTTTGGAAGAAATGATGAGGGCTGGCTTCAAGCCAACGGGGGCAACTTTCAACCCTATTATCGCTCATCTCTGCAAAGAGGGTAAGGTAGATCAAGTAATAAAGGTTCTAGATCAGATGATTTTTCAGCAATGCCATCCGAATGAGGGAACATATAATGCCATTGCTAAACTCTGTGATGATGGAAGAGTTCAAGAAGGATTCTCCATAATCCAACAATTAGGTAGTAAATCTCGTTTATCAGCTCATGACTTCAACAGAACTGTCCTCACTAGCTTGTGCAGGAAAAACAACACTTATCCCGCACTAATCTTACTGAATGAAATGATTAAGCATGGATTTGTTCCTGACTCCTATACTTATTCCTCTTTGTTAAGAGGACTGTGCTTGGAAGGAATGCTGGATGCCGCGATCACTATTTTCAAGTTAATGGAAGAAAATGACCGCAGACCTGATGTTGATAATTGCAATGCTTTGATACTT

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_305921.p1 GENE.S_Transcript_305921~~S_Transcript_305921.p1 ORF type:internal len:396 (-),score=63.98,PPR_2|PF13041.2|1.7e-07,PPR_2|PF13041.2|1.7e-10,PPR_2|PF13041.2|1.2e-11,PPR_2|PF13041.2|7.3e-13,PPR_2|PF13041.2|5e-16,PPR_2|PF13041.2|2.4e-15,PPR_2|PF13041.2|5e-10,PPR_2|PF13041.2|6.2e-10,PPR_2|PF13041.2|1.8e+02,PPR_2|PF13041.2|5.4e-10,PPR_2|PF13041.2|0.0017,PPR_1|PF12854.3|29,PPR_1|PF12854.3|1e-08,PPR_1|PF12854.3|2.4e-07,PPR_1|PF12854.3|0.00071,PPR_1|PF12854.3|5.6e-10,PPR_1|PF12854.3|2.1e-12,PPR_1|PF12854.3|9e-09,PPR_1|PF12854.3|1.1e-07,PPR_1|PF12854.3|0.26,PPR_1|PF12854.3|15,PPR_1|PF12854.3|3.1e-09,PPR|PF01535.16|0.26,PPR|PF01535.16|0.001,PPR|PF01535.16|0.0002,PPR|PF01535.16|0.098,PPR|PF01535.16|1.6e-06,PPR|PF01535.16|2.7e-06,PPR|PF01535.16|1.1e-07,PPR|PF01535.16|0.0085,PPR|PF01535.16|1.8e+02,PPR|PF01535.16|0.58,PPR|PF01535.16|5.4e-06,PPR_3|PF13812.2|25,PPR_3|PF13812.2|0.02,PPR_3|PF13812.2|0.0087,PPR_3|PF13812.2|5.9,PPR_3|PF13812.2|0.063,PPR_3|PF13812.2|0.062,PPR_3|PF13812.2|5e-05,PPR_3|PF13812.2|0.01,PPR_3|PF13812.2|4.6e+03,PPR_3|PF13812.2|57,PPR_3|PF13812.2|0.072 S_Transcript_305921:3-1187(-)
PDKSQATQLLYDLCKLSKFRKAIRVMEMMVSSGVKPDATSYTFLVNHLCKRGNVGYAMQLVEKMEEYGYPTNTVTYNSLVKGLCMIGNLNKSLQLLEQLTKKRLEPNVFTYTFLLEAAYKERGVDEAMRLLDEIIAKGGKPNLVSYNVLLTGLCKEGRTQEAISLFRNLPLKGFYPNVVTYNILLRTLCCEGRWKEAYELLGEMDNEERAPSIVTYNILISSLALHGQIHHAFEVLEEMMRAGFKPTGATFNPIIAHLCKEGKVDQVIKVLDQMIFQQCHPNEGTYNAIAKLCDDGRVQEGFSIIQQLGSKSRLSAHDFNRTVLTSLCRKNNTYPALILLNEMIKHGFVPDSYTYSSLLRGLCLEGMLDAAITIFKLMEENDRRPDVDNCNALIL

Click here to download the sequence:
Link to NCBI Protein BLAST