Transcript Information: S_Transcript_305931.p1


Annotated TAIR IDAT1G13990.3
Annotated Gene Nameunknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF3110 (InterPro:IPR021503); Has 4 Blast hits to 4 proteins in 1 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 4; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr1:4794810-4796476 | Forward length=308
E-Value9E-55
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 118.978123831645
Replicate 215.552458212674
Replicate 317.53571627621
Condition 2: 8 Hour
Replicate 119.053012660389
Replicate 217.420701809623
Replicate 318.345606545271
Condition 3: 24 Hour
Replicate 120.054319270054
Replicate 222.478042629
Replicate 318.192950062707


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_305931.p1 GENE.S_Transcript_305931~~S_Transcript_305931.p1 ORF type:5prime_partial len:122 (-),score=30.74 S_Transcript_305931:223-588(-)
AGGAATCGCAGCGAAGTCGAAAGAGAGCTTGGGTTGCTCTTTTCAAAAGGTCGAAAATGGGGCTCTGATTTTAGTAATCATGCCAAGCAATCTAAGAATGGCAAAAGGTTTGAGATGCTTGTCGAGGATGTCAGGGAAGGTGTACTTGTATTTGAAGACCAAAACGATGCTGTCAAATATTGTGACCTATTGCAGGGAGGGGGTCAAGGATGTGAAGGTGTTGCAGAGATAGAAGCATCATCTGTTTTCGATCTTTGTCGAAAATCACAAGCTTTGGCGGTTTTGTTTCGCCGAGGGAGGACACCACCTCAACCTGAAAGCCTTGAGCTTAACTTGAAAGCACGCAAGCGATCCCTTGAAGACTGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_305931.p1 GENE.S_Transcript_305931~~S_Transcript_305931.p1 ORF type:5prime_partial len:122 (-),score=30.74 S_Transcript_305931:223-588(-)
RNRSEVERELGLLFSKGRKWGSDFSNHAKQSKNGKRFEMLVEDVREGVLVFEDQNDAVKYCDLLQGGGQGCEGVAEIEASSVFDLCRKSQALAVLFRRGRTPPQPESLELNLKARKRSLED*

Click here to download the sequence:
Link to NCBI Protein BLAST