Transcript Information: S_Transcript_306135.p1


Annotated TAIR IDAT2G15680.1
Annotated Gene NameCalcium-binding EF-hand family protein
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr2:6831024-6831587 | Forward length=187
E-Value8E-37
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 116.429454844167
Replicate 220.93713702907
Replicate 317.125397791915
Condition 2: 8 Hour
Replicate 113.273967442297
Replicate 218.26273358345
Replicate 315.116851107614
Condition 3: 24 Hour
Replicate 115.269127745976
Replicate 214.569593156223
Replicate 314.798648503002


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_306135.p1 GENE.S_Transcript_306135~~S_Transcript_306135.p1 ORF type:5prime_partial len:196 (-),score=39.21,EF-hand_1|PF00036.28|5.3e-08,EF-hand_1|PF00036.28|7.9e-06,EF-hand_1|PF00036.28|2.1e-08,EF-hand_1|PF00036.28|2.6e-07,EF-hand_5|PF13202.2|8.4e-08,EF-hand_5|PF13202.2|1.6e-05,EF-hand_5|PF13202.2|4.9e-08,EF-hand_5|PF13202.2|0.00027,EF-hand_7|PF13499.2|3.1e-11,EF-hand_7|PF13499.2|1.1e-13,EF-hand_6|PF13405.2|2.9e-06,EF-hand_6|PF13405.2|0.0022,EF-hand_6|PF13405.2|3.3e-07,EF-hand_6|PF13405.2|0.0021,EF-hand_8|PF13833.2|0.00015,EF-hand_8|PF13833.2|0.038,EF-hand_8|PF13833.2|0.00046,EF-hand_8|PF13833.2|0.00015,SPARC_Ca_bdg|PF10591.5|9.3e-05,SPARC_Ca_bdg|PF10591.5|0.00093,EF-hand_9|PF14658.2|35,EF-hand_9|PF14658.2|5.7e-06 S_Transcript_306135:179-766(-)
CTAGGAATGTCAAACTTGAGTTTTCTCAAGGCTCAAGGCCTTAACCTCTCTCGAAAATCCTCCCTCGCCAATCCACCCCAAAGTAACACCTCAAGGTTCTCCATGAGACAAAAGACCAACACCAACAAGTCCAAAAGCTTCCAACCAAACATAGAAGAGATGAAGACGGTTTTTGACAAGTATGACACCAACAAGGACGGAAAGATCTCTAGGGAGGAGTATAAGTCCATGGTGAGGGCCATGAACGGGAAAGGTATAATAGTTAACACTGAAGCCGAAACCACAAAGGCATTCCAAGTCGCTGATAAGGATGCAGATGGGTTTGTCGATTTTAAAGAGTTCATGGAATTGCACAATAACAAGGTTAAGGTCAAGGACATTGAAAATGCATTTCGGGTGTTTGATTCCAATGGCGATGGGAAAATAAGTGCTAGTGAGCTCATGGAAGTGCTTCGGAGGATGGGAGAAAGGTATAGCTTGGAATCATGTAAGAAGATGATTAAAGAGGTTGACAACGATGGGGATGGCTTGATTGATATGGATGAGTTTAATACCATGATGACTCGCACTATGAAGTTGGCTAATTAA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_306135.p1 GENE.S_Transcript_306135~~S_Transcript_306135.p1 ORF type:5prime_partial len:196 (-),score=39.21,EF-hand_1|PF00036.28|5.3e-08,EF-hand_1|PF00036.28|7.9e-06,EF-hand_1|PF00036.28|2.1e-08,EF-hand_1|PF00036.28|2.6e-07,EF-hand_5|PF13202.2|8.4e-08,EF-hand_5|PF13202.2|1.6e-05,EF-hand_5|PF13202.2|4.9e-08,EF-hand_5|PF13202.2|0.00027,EF-hand_7|PF13499.2|3.1e-11,EF-hand_7|PF13499.2|1.1e-13,EF-hand_6|PF13405.2|2.9e-06,EF-hand_6|PF13405.2|0.0022,EF-hand_6|PF13405.2|3.3e-07,EF-hand_6|PF13405.2|0.0021,EF-hand_8|PF13833.2|0.00015,EF-hand_8|PF13833.2|0.038,EF-hand_8|PF13833.2|0.00046,EF-hand_8|PF13833.2|0.00015,SPARC_Ca_bdg|PF10591.5|9.3e-05,SPARC_Ca_bdg|PF10591.5|0.00093,EF-hand_9|PF14658.2|35,EF-hand_9|PF14658.2|5.7e-06 S_Transcript_306135:179-766(-)
LGMSNLSFLKAQGLNLSRKSSLANPPQSNTSRFSMRQKTNTNKSKSFQPNIEEMKTVFDKYDTNKDGKISREEYKSMVRAMNGKGIIVNTEAETTKAFQVADKDADGFVDFKEFMELHNNKVKVKDIENAFRVFDSNGDGKISASELMEVLRRMGERYSLESCKKMIKEVDNDGDGLIDMDEFNTMMTRTMKLAN*

Click here to download the sequence:
Link to NCBI Protein BLAST