Transcript Information: S_Transcript_306178.p2


Annotated TAIR IDATMG01250.1
Annotated Gene NameRNA-directed DNA polymerase (reverse transcriptase)
Annotated Gene Symbol(s)ORF102
Annotation TypeHomolog
Chromosome PositionchrM:310514-310882 | Forward length=122
E-Value6E-09
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10.19284783503754
Replicate 20.95925171989195
Replicate 30.66821507549277
Condition 2: 8 Hour
Replicate 11.2362545111381
Replicate 21.6211484521541
Replicate 32.7803279484758
Condition 3: 24 Hour
Replicate 10.94977754306931
Replicate 21.1496136306843
Replicate 32.375989690337


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_306178.p2 GENE.S_Transcript_306178~~S_Transcript_306178.p2 ORF type:complete len:138 (+),score=11.84,RVT_1|PF00078.23|2.7e-21 S_Transcript_306178:2774-3187(+)
ATGAATTGGGAGTTCATAAGGCAGGTTCTTCATCAATTTTGGTTTCTTAGTGTATATATTGGATGGGTTATGGAGTGTATCACCACCTTAAGGTTTTCAATCAACATAAATGGCTGTCCAAAAGGGTATTTTAACGGATGTTGTGGATTGAGGCAGGGTGATCCTTTATCTCTATACTTGTTTGTCATCTGTATGGAACCCATGTCTCGGATAATGAGGAATGTCTCAGCAGAAAAGGGATTTCATTTCCATCCCAAGATTGCTAGGGTTAGGCTTAATCACCTTATTTTTGCAGATGACCTCCTTATTTTCTCAAGGGGAGATGTCTCCTCAGCTAAGATGGTATTGAACTGCTTGCAAACTTTCTCTAACATGTATGGGTTGCACATTAACCCTGCTAAGTCTGATATATAG

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_306178.p2 GENE.S_Transcript_306178~~S_Transcript_306178.p2 ORF type:complete len:138 (+),score=11.84,RVT_1|PF00078.23|2.7e-21 S_Transcript_306178:2774-3187(+)
MNWEFIRQVLHQFWFLSVYIGWVMECITTLRFSININGCPKGYFNGCCGLRQGDPLSLYLFVICMEPMSRIMRNVSAEKGFHFHPKIARVRLNHLIFADDLLIFSRGDVSSAKMVLNCLQTFSNMYGLHINPAKSDI*

Click here to download the sequence:
Link to NCBI Protein BLAST