Transcript Information: S_Transcript_30647.p1


Annotated TAIR IDAT1G02170.1
Annotated Gene Namemetacaspase 1
Annotated Gene Symbol(s)LOL3, ATMCPB1, MCP1B, ATMC1, MC1
Annotation TypeHomolog
Chromosome Positionchr1:411883-413426 | Forward length=367
E-Value2E-64
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 14.8637553981537
Replicate 26.5427582825734
Replicate 34.3880992750636
Condition 2: 8 Hour
Replicate 15.735794637022
Replicate 25.8629672297215
Replicate 37.2032864320282
Condition 3: 24 Hour
Replicate 14.2183223292182
Replicate 24.2201580176647
Replicate 34.8704637471948


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_30647.p1 GENE.S_Transcript_30647~~S_Transcript_30647.p1 ORF type:complete len:290 (+),score=58.70,Peptidase_C14|PF00656.18|5e-44 S_Transcript_30647:723-1592(+)
ATGTATAATGCATGTCCTAGGGGTATCTCTGGGGCAAGACTGGGGAAGCGAGCACTGATTTGTGGGGTAAGCTACAATAAGCAGAAGTACAAGCTCAAAGGAACTCTTACTGATGTTTACAACATAAAAGACCTTCTGATGAATCAATACCATTTCCCTGAAAATGCAATTAGAGTTCTCACAGAGGAGGATGAGCCACATCGGATGCCAACGAAGGATAACATTGAGGATGGCTTGAGATGGCTCGTAGAGGGATGCAAATCAGGGGATTCATTGGTGTTTTACTTCTCTGGACATGGATTGCGCCAGCCTGATTTTGATAATGATGAGCTTGATGGATTTGATGAAATGTTATGCCCTGTTGATTTTAAGACCAAAGGATTAATCCTAGACAATGACATCAACACCATTATTGTTAGGCCTCTGACTAAAGGTGTAACTCTTCATGCAATTATTGATGCTTGTCACAGTGGGACCATCTGTGATCTTGAGTACTTGTATAGTTTGAAAGAGGGAAGATGGTTGGATAACAGAGCTCCTTCTGGAGCTAAAAAGTGTACAAGTGGCGGTCGTGCCATCTGTTTTAGTGCTTGTCGTGATGACCAAATGGCTGCTGACACCAATGCTTTCACAAGAAAGGGCAGAAGAGGTGTCATGACACATAGTTTCATCCAAGCGATTCTGGAGAAACCAAAGTTGACGTACTTTGAACTATTAAGTTCAGTGCAGGAGATCATCATTGAAACTTTTGCATCAAGATGCTTCAGTTCCAAGCTCATGGATAAGTTGTTAAACCGCAAGTTATCGCAGGAGCCACAGTTGTTTTCTTCTGAAGCTTTTGATATTGAAAACACAGAGTTCAAGTTGTGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_30647.p1 GENE.S_Transcript_30647~~S_Transcript_30647.p1 ORF type:complete len:290 (+),score=58.70,Peptidase_C14|PF00656.18|5e-44 S_Transcript_30647:723-1592(+)
MYNACPRGISGARLGKRALICGVSYNKQKYKLKGTLTDVYNIKDLLMNQYHFPENAIRVLTEEDEPHRMPTKDNIEDGLRWLVEGCKSGDSLVFYFSGHGLRQPDFDNDELDGFDEMLCPVDFKTKGLILDNDINTIIVRPLTKGVTLHAIIDACHSGTICDLEYLYSLKEGRWLDNRAPSGAKKCTSGGRAICFSACRDDQMAADTNAFTRKGRRGVMTHSFIQAILEKPKLTYFELLSSVQEIIIETFASRCFSSKLMDKLLNRKLSQEPQLFSSEAFDIENTEFKL*

Click here to download the sequence:
Link to NCBI Protein BLAST