Transcript Information: S_Transcript_306569.p1


Annotated TAIR IDAT4G22980.1
Annotated Gene NameFUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 13 plant structures; EXPRESSED DURING: 9 growth stages; BEST Arabidopsis thaliana protein match is: Pyridoxal phosphate (PLP)-dependent transferases superfamily protein (TAIR:AT5G51920.1); Has 520 Blast hits to 468 proteins in 130 species: Archae - 5; Bacteria - 23; Metazoa - 99; Fungi - 131; Plants - 231; Viruses - 0; Other Eukaryotes - 31 (source: NCBI BLink).
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr4:12043974-12045653 | Reverse length=559
E-Value1E-60
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10.48387274973055
Replicate 20.45844757522109
Replicate 30.19161284242702
Condition 2: 8 Hour
Replicate 10.6092968662038
Replicate 20.58108697765524
Replicate 30.38756086554511
Condition 3: 24 Hour
Replicate 10.056739957118426
Replicate 20.29433521527724
Replicate 30.32755901824826


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_306569.p1 GENE.S_Transcript_306569~~S_Transcript_306569.p1 ORF type:3prime_partial len:385 (+),score=72.57 S_Transcript_306569:788-1939(+)
ATGATCAACAGCTCAGAAAAGAGAGGAGCACAAGCAATGGCAGCCGAGTTTACCTGGCCAAGGCTAAGAATACACTCGTCGAAACTAAGGGATATGATTATCAGTAAGAGGCTAAGAAACAAGAAGAGGGGTTTATTTGTTTTTCAGCTCCAGTCAAGAGTGACAGGTGCTAGATACTCTTACCAGTGGATGCGGGTGGCACAGGAACATGGCTGGCATGTCCTGCACGATGCCTGTGCTGTCGGGCCAAAGGACATGGATAGCCTGGGACTCTCACTCTTTCAACCAGATTTCCTGATTTGCTCCTTCTACAAGGTTTTTGGGGAAAACCCATTAGGGTTTGGGTGCCTGTTTGTCAGGAAATCGGCTATTTCTATCCTGGAAGAATCAACAACTGCAGGAATCGCAACTATTGTCTCAGCAAGAAGGCTATTTTACCTGCCTGAGGAATCTTCTGGTACAGAAACTGAGATTGAACAAGAATATGATTTGGGTTCATCATCCAACTCGTTCTCAGGTCCGATATTTCCACAATGGGAACACGGAGAGACCTCCGAGTCAGGAGCTATTAGAGATACGAGTGCAAAGCAGAATGGAGAGAAATTCCCTCAGGTTGTGGAGCTAGCAGAGAAATGGTCTGAAATTCTAGAAGTAGCGGAAAACAGTGACCTCTCAGAGTGGCGAAACACCAGAATGATGAGGAAGAAAAAGAATTCCTTCGTTGAATGCAGGTGCTTGAATCAAATAGATTCATTGGGGCTCTCAGTTGTGAATAGCAGGAGCAGGTACCTTGTCAACTGGCTCATAAATGCCTTGCTGAAGCTTCGGCATCCAAATGCAGACAAGGGAGCTCACTTGGTAAAGATATATGGGCCAAAGATCAAGTTTGATAGAGGACCAGCCTTGGCTTTCAATGTGTTTGATTGGAAAGGAGAAAAGGTGGAGCCAATTCTGGTGCAGAAACTGGCTGATCGAAAGAGCATATCCCTTAGCTACGGCTTTCTGCACCATATTTGGTTCCCGGAGAAGTATGAAACCGGAAAGGTTGGAATTATTGAGAAAGGAAGATGTGAAGCCAAGGAAAGTAGTTCAGGGAACAAATTAAGAAAAGAAAAGGAAAGCCTTGGTATAAGAGTAGTTACAGCCGCGTTT

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_306569.p1 GENE.S_Transcript_306569~~S_Transcript_306569.p1 ORF type:3prime_partial len:385 (+),score=72.57 S_Transcript_306569:788-1939(+)
MINSSEKRGAQAMAAEFTWPRLRIHSSKLRDMIISKRLRNKKRGLFVFQLQSRVTGARYSYQWMRVAQEHGWHVLHDACAVGPKDMDSLGLSLFQPDFLICSFYKVFGENPLGFGCLFVRKSAISILEESTTAGIATIVSARRLFYLPEESSGTETEIEQEYDLGSSSNSFSGPIFPQWEHGETSESGAIRDTSAKQNGEKFPQVVELAEKWSEILEVAENSDLSEWRNTRMMRKKKNSFVECRCLNQIDSLGLSVVNSRSRYLVNWLINALLKLRHPNADKGAHLVKIYGPKIKFDRGPALAFNVFDWKGEKVEPILVQKLADRKSISLSYGFLHHIWFPEKYETGKVGIIEKGRCEAKESSSGNKLRKEKESLGIRVVTAAF

Click here to download the sequence:
Link to NCBI Protein BLAST