Transcript Information: S_Transcript_30660.p1


Annotated TAIR IDAT5G58900.1
Annotated Gene NameHomeodomain-like transcriptional regulator
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr5:23783275-23784667 | Reverse length=288
E-Value8.9E-80
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 141.048835853526
Replicate 233.786190650807
Replicate 330.556415134822
Condition 2: 8 Hour
Replicate 147.372269265366
Replicate 243.257744233272
Replicate 337.912319356461
Condition 3: 24 Hour
Replicate 128.454774436088
Replicate 226.510805423255
Replicate 325.408184954231


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_30660.p1 GENE.S_Transcript_30660~~S_Transcript_30660.p1 ORF type:complete len:271 (+),score=49.31,Myb_DNA-binding|PF00249.27|0.00017,Myb_DNA-binding|PF00249.27|7.5e-11,Myb_DNA-bind_6|PF13921.2|0.26,Myb_DNA-bind_6|PF13921.2|0.00075 S_Transcript_30660:89-901(+)
ATGGGTGCATTATGTCCAACATCAATGTTCTCAAACACAAGTTATAATTGGCTGTTTCAAGGGAATAGCAAGAGCACAATATGGACAAAGGAAGAGAACAAGGAGTTTGAGAGAGCACTAGCAGTATATGATGAGAAAACTCCAGATAGATGGCTAAAAGTGGCTGCTATGTTACCTGGGAAATCAGTTTGGGATGTGATTAAACAATATGAAGAGTTGATAGAAGATGTGACTGATATTGAGGCTGGTTTGGTCCCTATTCCTGGCTATCTCACCTCTCCTTTCACTTTAGAGTGGGTTGACAATAGAAATTTTGATCCCTTCAGAAAGAGATCAGTTTCTCTTCCTAGGCCTCCTGAACAGGAAAGGAAAAAAGGGGTTCCTTGGACTGAGGATGAACATAGACGGTTTCTACTGGGCCTCCAGAAGCATGGGAAAGGGGACTGGAGGAACATATCGCGGAACTTTGTGATCTCAAAGACACCAACTCAAGTCGCTAGCCATGCTCAGAAATACTTCCTGAGACAAAATTCAGGAGGGAAGGATAAGCGAAGACCTAGCATTCACGATATCACTACAGCTAATCTCACAGAAACTTTGCCAATACTGTCCGAGACAGATGAGAAGCCGAAATCACTGCTAGAGCCGTCTAATTCACTCCCATTGCTCCAAAAATCCCTCAACATAATGCCTAAGATGCTACTTGATTGGAGTAACTCTAGTACCGAAGCTTTGGTTGTCTTCAATTCTACTCATGGAAGGCAGAATCTGTACAGCAGCGCCTGTCAAGGAGCTTATGTAGGATCCAATTAG

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_30660.p1 GENE.S_Transcript_30660~~S_Transcript_30660.p1 ORF type:complete len:271 (+),score=49.31,Myb_DNA-binding|PF00249.27|0.00017,Myb_DNA-binding|PF00249.27|7.5e-11,Myb_DNA-bind_6|PF13921.2|0.26,Myb_DNA-bind_6|PF13921.2|0.00075 S_Transcript_30660:89-901(+)
MGALCPTSMFSNTSYNWLFQGNSKSTIWTKEENKEFERALAVYDEKTPDRWLKVAAMLPGKSVWDVIKQYEELIEDVTDIEAGLVPIPGYLTSPFTLEWVDNRNFDPFRKRSVSLPRPPEQERKKGVPWTEDEHRRFLLGLQKHGKGDWRNISRNFVISKTPTQVASHAQKYFLRQNSGGKDKRRPSIHDITTANLTETLPILSETDEKPKSLLEPSNSLPLLQKSLNIMPKMLLDWSNSSTEALVVFNSTHGRQNLYSSACQGAYVGSN*

Click here to download the sequence:
Link to NCBI Protein BLAST