Transcript Information: S_Transcript_306650.p1


Annotated TAIR IDAT1G43730.1
Annotated Gene NameRNA-directed DNA polymerase (reverse transcriptase)-related family protein
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr1:16508723-16509784 | Reverse length=320
E-Value4E-06
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10.22553390877272
Replicate 20
Replicate 30.15629437358984
Condition 2: 8 Hour
Replicate 11.4457891740429
Replicate 20.3791838752496
Replicate 30.72257110525361
Condition 3: 24 Hour
Replicate 10.37025226255244
Replicate 20.19206619979955
Replicate 30.42749227805281


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_306650.p1 GENE.S_Transcript_306650~~S_Transcript_306650.p1 ORF type:5prime_partial len:118 (+),score=14.67,zf-RVT|PF13966.2|2e-13,zf-RVT|PF13966.2|3.5e+03 S_Transcript_306650:2-355(+)
AAAGCAAAGGTCCCTCTAAAGGTGAGGGCTTTTGTGTGGACCTTTGCTTTAGGGAAGATCAACAATAATGATATGCTGCAACTTCGGCGGCCTCTTTGGTGTCTTTCACCTGATAAGTGTTTCATGTGTCACACGAGTGGGGAGTCGGCCTCTCATCTTTTTCTCCATTGCCCTTTTATGCGGTCTTTGTGGGCTTTGCTCTTTGGTGTGTGGGGGGAAGCCCTGGTCTGTCCATCTACAGTTTTGGAGTTCCTCCGGATGCATTTTTTGGCTTTAGGTTTGTTATGGAGGAACGCGATTTTTTCTACTTTGTGGTGTGTTTGGTTGGAGCAGAATGCTAGGGTGTTTGAGTAG

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_306650.p1 GENE.S_Transcript_306650~~S_Transcript_306650.p1 ORF type:5prime_partial len:118 (+),score=14.67,zf-RVT|PF13966.2|2e-13,zf-RVT|PF13966.2|3.5e+03 S_Transcript_306650:2-355(+)
KAKVPLKVRAFVWTFALGKINNNDMLQLRRPLWCLSPDKCFMCHTSGESASHLFLHCPFMRSLWALLFGVWGEALVCPSTVLEFLRMHFLALGLLWRNAIFSTLWCVWLEQNARVFE*

Click here to download the sequence:
Link to NCBI Protein BLAST