Transcript Information: S_Transcript_306867.p1


Annotated TAIR IDAT5G46560.1
Annotated Gene NameCONTAINS InterPro DOMAIN/s: Inner nuclear membrane protein MAN1 (InterPro:IPR018996); Has 58 Blast hits to 58 proteins in 29 species: Archae - 0; Bacteria - 4; Metazoa - 11; Fungi - 15; Plants - 20; Viruses - 0; Other Eukaryotes - 8 (source: NCBI BLink).
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr5:18888061-18890090 | Forward length=387
E-Value0.0004
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10.26881819429475
Replicate 20.44571292035383
Replicate 30.18629026347071
Condition 2: 8 Hour
Replicate 10
Replicate 20
Replicate 30.86124636787803
Condition 3: 24 Hour
Replicate 10.66196616638164
Replicate 20.45785477932015
Replicate 30


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_306867.p1 GENE.S_Transcript_306867~~S_Transcript_306867.p1 ORF type:5prime_partial len:99 (+),score=10.95 S_Transcript_306867:2-298(+)
GACAGAGAACCCTGGTTAGTTGCCTCTAGGCTACGAGATCACCTACTTTCCCCTATTGAAAGAAAGGATTCTCGTCTGTGGAAGATGGTATGTCCTCTTTCTTTACAACTCATGTGGGATTCTTGGAGCATTTTTGAAATTTATAGTGCATGCATTCTTGATGTTTCAGCACTTACCTCTGCTGTATGGGGCATTAGTTTTCTCCTATCCTTTATCTTTACCCTTGGGACTGGGATTAGTGGAAGTGGCTTCAATTGGAACATCAAGGAAATTGCTTGTAATTTAAAAAGTAGTTGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_306867.p1 GENE.S_Transcript_306867~~S_Transcript_306867.p1 ORF type:5prime_partial len:99 (+),score=10.95 S_Transcript_306867:2-298(+)
DREPWLVASRLRDHLLSPIERKDSRLWKMVCPLSLQLMWDSWSIFEIYSACILDVSALTSAVWGISFLLSFIFTLGTGISGSGFNWNIKEIACNLKSS*

Click here to download the sequence:
Link to NCBI Protein BLAST