Transcript Information: S_Transcript_30693.p1


Annotated TAIR IDAT1G75660.1
Annotated Gene Name5'-3' exoribonuclease 3
Annotated Gene Symbol(s)XRN3, AtXRN3
Annotation TypeHomolog
Chromosome Positionchr1:28408289-28414825 | Forward length=1020
E-Value9E-153
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 15.6284968129577
Replicate 24.2857602703678
Replicate 33.4341646500498
Condition 2: 8 Hour
Replicate 16.9613917816848
Replicate 26.5058364435067
Replicate 36.4927581785288
Condition 3: 24 Hour
Replicate 14.494522005536
Replicate 25.1319205523453
Replicate 36.1460613952697


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_30693.p1 GENE.S_Transcript_30693~~S_Transcript_30693.p1 ORF type:complete len:870 (+),score=178.65,XRN_N|PF03159.14|6e-47,XRN_N|PF03159.14|1.1e+03 S_Transcript_30693:1970-4579(+)
ATGGAAGAAGTAGAAAATAGGATGCGAGAAGAGTTTGAAAAGAAGGGGAGGAGGGTGCTCCCTAAGCTGAAATCTGAAGTTTGGGATTCGAATATCATAACCCCAGGCACAGAATTCATGGCCGACTTGTCCAAGGCCTTGGAAACTTACATCTCCCAAAGGCTTAAAAATGATCCTAGTTGGAGAAAGATTGAGGTGGTTCTTTCTAATGCTAATGTTCCTGGTGAAGGGGAACACAAGATAATGTCGTTTATACGCAGCCAGCGTAGTCTTCCTGGCTATGATCCAAATACAAGGCATTGCCTTTATGGACTGGATGCTGATCTGATTATGCTTGCATTGGCCTCACATGAACTACATTTTACAATATTACGAGAGGATGTGGTGACAGTGTGTGAACAGAAACCTGATCCTGAATCAGCACTTCTCTGCAGCATAAGGAAGGCTGAAGAGCAATCCTTGGGAAAGTATAGCGGATATGTGAATAAGCCCTTCTTTGACATTCATGATAAAAAACCCTCTTTGCTTAATCAGCCGCAACATTTTCAATTTGTCCATGTTTGGATTTTGAGGGAATACCTTGAGCTTGACATGCAGATAAAAGAAGTACCTGACAAGTTTGTTTTTGATATTGAGCGTATAGTGGATGACTTTGTTTTCATCTGTTTCTTTGCTGGGAATGATTTTCTACCCCACATGCCTACTTTGGAAATACATGAGAACGGCATGGATTTGCTTATGCATGTGTACAAGAAAGAGATGAAAAATCTTGGTGGATATTTGGTTGATTTGCAGAGGGTAAACGATAGACATGGTGGGTATGTTAAGCTGAAACGGGTGGAGAGGTTCATCCTTTCTGTTGGGAGCTTTGAAGAAGAGATTTTCAAGAAAAGAACTGAATTGAGGGAAAGAAAAATCAGACGGATTTTTTGGGAGTTGTCGGAAACAAAAGAAGATGAAATTGAGAACGAAGATATGGAAGCCACCACAGATGATGTGAATTGTCAGAATGACCCTAATCTCTGCCCGTCTGATGAAAATGATCCAGTGATAAATGCTGATATGGGAAGTTATTCAACCTCAGAGCTCCAAGAGATGCTTCAAAACAGTAAGGAGTTGAAAGAGAAGCTAAAGAAATATACTCATAAGGATTCAGATACATTCAGCAATGGGAGTTCGGGTTCGGACAAGGTGAAGTTGGGTACTCCGGGGTGGAAGCAAAGATATTACAAGGAGAAATTTTTGGCGGACCCTGAGGATATCGAAATCAAGAGAAAGGAAATAGTGGAGAAGTACACAGAAGGATTATGTTGGGTTCTGCTTTACTACTATTCTGAGATACCATCCTGGAATTGGTACTACCCATACCACCATGGCCCCTTTGCTTCAGACCTGAAAGGTTTAACACAAGTAAAGGTGAAATTTCAAAAGGGTTCTCCTTTTGACCCGTTTGATCAGCTAATGGCTGTGCTACCACCTAGAAGTGCTCATGCACTTCCGAAACTCTACCAAGAGCTGATGACAGATGGCAGCTCCAGTATCGTAGAGTTCTATCCAAGAGATTTTGAAGTTGATGTTGATGGTAAGAGGTTTATGTGGCAGGGCATCTGCAAGCTTCCCTTCATTAATCAAGAAGTACTTCTCAGCGCAACCAAAAAACTTAAGGGAAAATTAGAGGAGACTGAAGCAAGTAGAAACATTCAGGGAAGTAATCAGTTGCTCACAAGAGGCTCAAGCAGAGCTGATGGAAAGATATGGAGCTATCTCCAGCAGCGGGCAGAAACCAAGGAATTAACAATTCAACCTGCTAAGGGAGAAAATGAAATCTTGTGCTTCAATTTTGAGTTGCCTATAGCCTCAGTGCATATACCGCGTCTCCTAGAAGGGGTTCAACTTCCAGAAAAGATGATACTAGAAAATGACATCATGGAGACGCCTCTTTGGCATGAGTGTGCCCGACCACCTACGTCTAGATTTCCAGCACAGGACAGGTACAGGAGGTTTGCGAATGATTCCAAGAAAGAAAGAATGACGCAGGAAACCTCTACTCCCAGGAGCAGAGGATGGTTCAAAGAGCCTACTTTTGATTGCCAGAAAGATGGAACAATGCGTGAAACCTCTGCTCAGAGTTACAAGAAAGAAAGATCGACCCAAGAAACCTCTATATACAAATACCCTGGACCTGGTCGCGGTTTTCATCAAGCTGGTAGGGGGAGGGGAACAAGCTGCAGTGTATCTGAGCCTAGATATGACATTGTCAACCGATGGGCTAAAAAACCAATAGGGTACCAACAATCTTCGATGTCAGCAACCTCATCTGGAGGGTATCATCACAACTCTTCTCCCTCATTCTCTTACAAAAATGCAGTGGAGGAAGCTCCTTACATCAGCAGGGGCATGGAGAACATGAGATTATCACAATCTGACGCAACCGGATCATACAGGAGAAAAGATCGTAGTGCACAGTTTGGTTTCTGGACTTCACGAAGTAGCACAGTTTCTCATGACAATTCCTCTTGGCGGCCAGCTTCTCATGCTAAGCCTACTAGTGAAGGAGGGAACATGCAACAGTTTACTGGCAGGGGAAGAGGCCAATTTAGGCCTAACTAA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_30693.p1 GENE.S_Transcript_30693~~S_Transcript_30693.p1 ORF type:complete len:870 (+),score=178.65,XRN_N|PF03159.14|6e-47,XRN_N|PF03159.14|1.1e+03 S_Transcript_30693:1970-4579(+)
MEEVENRMREEFEKKGRRVLPKLKSEVWDSNIITPGTEFMADLSKALETYISQRLKNDPSWRKIEVVLSNANVPGEGEHKIMSFIRSQRSLPGYDPNTRHCLYGLDADLIMLALASHELHFTILREDVVTVCEQKPDPESALLCSIRKAEEQSLGKYSGYVNKPFFDIHDKKPSLLNQPQHFQFVHVWILREYLELDMQIKEVPDKFVFDIERIVDDFVFICFFAGNDFLPHMPTLEIHENGMDLLMHVYKKEMKNLGGYLVDLQRVNDRHGGYVKLKRVERFILSVGSFEEEIFKKRTELRERKIRRIFWELSETKEDEIENEDMEATTDDVNCQNDPNLCPSDENDPVINADMGSYSTSELQEMLQNSKELKEKLKKYTHKDSDTFSNGSSGSDKVKLGTPGWKQRYYKEKFLADPEDIEIKRKEIVEKYTEGLCWVLLYYYSEIPSWNWYYPYHHGPFASDLKGLTQVKVKFQKGSPFDPFDQLMAVLPPRSAHALPKLYQELMTDGSSSIVEFYPRDFEVDVDGKRFMWQGICKLPFINQEVLLSATKKLKGKLEETEASRNIQGSNQLLTRGSSRADGKIWSYLQQRAETKELTIQPAKGENEILCFNFELPIASVHIPRLLEGVQLPEKMILENDIMETPLWHECARPPTSRFPAQDRYRRFANDSKKERMTQETSTPRSRGWFKEPTFDCQKDGTMRETSAQSYKKERSTQETSIYKYPGPGRGFHQAGRGRGTSCSVSEPRYDIVNRWAKKPIGYQQSSMSATSSGGYHHNSSPSFSYKNAVEEAPYISRGMENMRLSQSDATGSYRRKDRSAQFGFWTSRSSTVSHDNSSWRPASHAKPTSEGGNMQQFTGRGRGQFRPN*

Click here to download the sequence:
Link to NCBI Protein BLAST