Transcript Information: S_Transcript_307137.p1


Annotated TAIR IDAT3G20980.1
Annotated Gene NameGag-Pol-related retrotransposon family protein
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr3:7355963-7357966 | Forward length=405
E-Value5E-06
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10
Replicate 20.35585144447604
Replicate 30.44619522782905
Condition 2: 8 Hour
Replicate 12.0637474500451
Replicate 23.7887808180182
Replicate 31.890921964958
Condition 3: 24 Hour
Replicate 10.88084207623364
Replicate 20.1827726740028
Replicate 30


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_307137.p1 GENE.S_Transcript_307137~~S_Transcript_307137.p1 ORF type:5prime_partial len:124 (+),score=12.02 S_Transcript_307137:2-373(+)
AGCAACATAATCTGGATACTTCAACTTCTCAGGGGCCTAGCTCTTCAAGCTCCTCTTCTGCTTTCCTGGCAGGTAGCAGGTAAAGCTTTATGTTTCCTTTCTTCGAGTACTGCTCATAGCTGGATTATTGACAGTGGTGCTAGTGATCATATAACACCACATCTCAAATTTTTTGCTACCTATCAACCTCTTTCTCACCCTTGTTCTATTACTATGCCAAATGGTTTACAAGCTTCTCTTGAACACATTGGGACTGTCAAACTTAATTCTAACTTGACTTTACACAATGTGCTACGTGTTCCTGCATTTCACTTTAGTCTCTTTACTCTCTTATCCATTCAGAAATCGAATGCTCAACTTTCTTCTAAATGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_307137.p1 GENE.S_Transcript_307137~~S_Transcript_307137.p1 ORF type:5prime_partial len:124 (+),score=12.02 S_Transcript_307137:2-373(+)
SNIIWILQLLRGLALQAPLLLSWQVAGKALCFLSSSTAHSWIIDSGASDHITPHLKFFATYQPLSHPCSITMPNGLQASLEHIGTVKLNSNLTLHNVLRVPAFHFSLFTLLSIQKSNAQLSSK*

Click here to download the sequence:
Link to NCBI Protein BLAST