Transcript Information: S_Transcript_307398.p1


Annotated TAIR IDAT5G53110.1
Annotated Gene NameRING/U-box superfamily protein
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr5:21529022-21533008 | Forward length=382
E-Value8E-33
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 11.6068227160864
Replicate 22.331162670228
Replicate 31.5310950710914
Condition 2: 8 Hour
Replicate 11.7704097621771
Replicate 21.6884414067718
Replicate 31.7696175370173
Condition 3: 24 Hour
Replicate 11.3189363616962
Replicate 21.6249525281155
Replicate 33.5215684641105


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_307398.p1 GENE.S_Transcript_307398~~S_Transcript_307398.p1 ORF type:complete len:265 (+),score=0.78 S_Transcript_307398:348-1142(+)
ATGCAAAATCTTGTTCACACAACAACTAGCATCATACCGATTATTTTCTCTCTCCTAATAATCCAATCTACAGCCCTCGAAAGTTGCGCCCCTTTCTCGTGCAATCGTCATCGCCGTGACACAATCCAGTTCCCATTTTGGGTGCCCCGAACCCAATCAAACCGGTGCGGATATCCGGGTTTCAACCTCTCATGTGACGGCGACGAAACACTCCTCCACCTCAAAAATTCCAACCCCTTCACTGTACGTGCAATCGATTACCCAGACCAGCTCATTTGGGTCACCGACCCGAACCGTTGTCTCCCAAAACGGGTCCTGGAGTTGAACCTGACCAAAACACCGTTCGTGTCGGGTCCGTCAAACACAGAGTACTCCTTCCTGAACTGCTCAAGTGCGGTGAATAATAATGATTCGGTTTTTGTTCCAGACGGTACGTCGGTAGTTTCTTGCTTAAGTGAGAGGAATTTCACGGTGTTTTTGACATTTGAGAAAGGGTCGGAACAGAAGATGGTGAATGAATGGAAGTGTAAAGTAATTAAGAGGGTGGTTGCTCCCATTTGGTGGCCGGATTTCGGGTACGGGTTTATTCCACCCGATTTGAGTAATGTTTTCTTACAGTTGAGCTGGGATATTCCTGATTGTGGGGATTGTCAACTTCGGGGCGGGTCTTGTGGGTTTGTGTCGGATTCGGGTTTCTCTGTTGGTTGCTTTCTTCCCAACGGCAATGGTAGTGAGTCCCCTTCTCTTCAACTCTTGATTCACTCATTATTTTCTACTCCCTCAATTTCTAATTAA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_307398.p1 GENE.S_Transcript_307398~~S_Transcript_307398.p1 ORF type:complete len:265 (+),score=0.78 S_Transcript_307398:348-1142(+)
MQNLVHTTTSIIPIIFSLLIIQSTALESCAPFSCNRHRRDTIQFPFWVPRTQSNRCGYPGFNLSCDGDETLLHLKNSNPFTVRAIDYPDQLIWVTDPNRCLPKRVLELNLTKTPFVSGPSNTEYSFLNCSSAVNNNDSVFVPDGTSVVSCLSERNFTVFLTFEKGSEQKMVNEWKCKVIKRVVAPIWWPDFGYGFIPPDLSNVFLQLSWDIPDCGDCQLRGGSCGFVSDSGFSVGCFLPNGNGSESPSLQLLIHSLFSTPSISN*

Click here to download the sequence:
Link to NCBI Protein BLAST