Transcript Information: S_Transcript_307537.p1


Annotated TAIR IDAT1G13340.1
Annotated Gene NameRegulator of Vps4 activity in the MVB pathway protein
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr1:4569622-4571043 | Reverse length=409
E-Value1.6E-89
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10.35802243814144
Replicate 20.34627696614934
Replicate 30.49621711435697
Condition 2: 8 Hour
Replicate 10.43033298846232
Replicate 20.25080547802384
Replicate 30.90807422532432
Condition 3: 24 Hour
Replicate 10.34285691577166
Replicate 20.3048943261392
Replicate 30.1696550072093


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_307537.p1 GENE.S_Transcript_307537~~S_Transcript_307537.p1 ORF type:complete len:446 (+),score=122.20,Ist1|PF03398.10|2.5e-52,Ist1|PF03398.10|8.5e+02 S_Transcript_307537:129-1466(+)
ATGGGAAAGAAGCTTGATGCTCTGCTAGGAAGAAGCTTCAAGGCCTCAAAATTCAAGGCTCTTGTCAACCTTGCCTTATCTCGGCTTGCTGTCCTCAAGAACCAGAAGCAAACCCGCTGCTCCATGGCTCGTAATGATGTCCTTCAATTCCTTAACATCGGTCAACATGACCGAGCTCTCCTCAGGGTTGAGCAAGTGATCAAGGAGCAAAACATGCTGGATGTGTTTGTCATGATCGAGGGATATTGTGTTCTTCTAAGTGAGAGGGTCAAACTCGTAGAACATGACAAAGAATGCCCTGATGAGCTCAAAGAGGTGATATCTAGCCTTATTTTTGCTGCTTCAAGATGTGGAGAATTCCCAGAACTGCAAGAGATGCGTTCAGTTTTGACAACTCGATATGGGAAAGAGTTTACTGCTCGTGCTATTGAGTTGCGCAACAGTTGTGGCGTCAACACTAAGATGATTCAGAAGCTGTCTACCAGGCAACCGAGCTTAGAAGCCAGAATGAAGGCATTGAAAGAGATAGCCGATGAGAATGGTATTGCTCTAAAGCTAGAGGACTCTTTGTCGATTCTAGCTCAGGAAGAACTGCACAGGAAGGAAAACCAGCCTGCACCAAACAGGTCAGCAAGTTTGGATAGTCCTAAAGTTGGAGAGAATATGGGCAGTTATACTGAAAATATAGACAATATTGAAGGATTCAGTGATTCAATGCATAGAAGAAAGCACTATAAAGATGCTGCTGATGCAGCCCAAGAAGCTTTCATGTCAGCAGCATATGCAGCAAGGGCTGCAAGGGCAGCTGTGGAGCTCTCTCGGTCTAGCCCCCGAGCACCAGATAATTCCAATAGTCCAACTGATCAAAGAAAACACGTCTTCAATTCAGATAGCGACATAAAACCTAGAATTGAAACTAGTAAGGTAGACGATTCAGGGGAAACTGCAGAGCCAGTGCTGGGGCTCGACAAGGCTCATCCTGTTGGCAGGCTTAGCCTCAATTCAGATGATGAAGTGACCGAAGAAAAGACTGAAGTTCCTGAGGTAAGGTTTTCAGGAGCACAAGAAGAAAAGGAGAAAAAATTGCCACACAAGGCTATGTTTGATGAGAGTGATGATGAGGTTAAGAATGAGAAGTTCAATTTTCTCAGTGAGGATAATCCATGGGGAGAAAGAGGAACTAAGTCGCATTATTCCAATGAGAAGCTGACGCCTTCAAGATTTCAAGCAGGTTCAGGAATAGATCATGAGCCACATTTCTCTGCAGAATTTGCAGTAAAGAGTGCACACAGGATGAATACACTGAACAGGCCAGTTTCTGTGAGGACCAGAAGATAG

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_307537.p1 GENE.S_Transcript_307537~~S_Transcript_307537.p1 ORF type:complete len:446 (+),score=122.20,Ist1|PF03398.10|2.5e-52,Ist1|PF03398.10|8.5e+02 S_Transcript_307537:129-1466(+)
MGKKLDALLGRSFKASKFKALVNLALSRLAVLKNQKQTRCSMARNDVLQFLNIGQHDRALLRVEQVIKEQNMLDVFVMIEGYCVLLSERVKLVEHDKECPDELKEVISSLIFAASRCGEFPELQEMRSVLTTRYGKEFTARAIELRNSCGVNTKMIQKLSTRQPSLEARMKALKEIADENGIALKLEDSLSILAQEELHRKENQPAPNRSASLDSPKVGENMGSYTENIDNIEGFSDSMHRRKHYKDAADAAQEAFMSAAYAARAARAAVELSRSSPRAPDNSNSPTDQRKHVFNSDSDIKPRIETSKVDDSGETAEPVLGLDKAHPVGRLSLNSDDEVTEEKTEVPEVRFSGAQEEKEKKLPHKAMFDESDDEVKNEKFNFLSEDNPWGERGTKSHYSNEKLTPSRFQAGSGIDHEPHFSAEFAVKSAHRMNTLNRPVSVRTRR*

Click here to download the sequence:
Link to NCBI Protein BLAST