Transcript Information: S_Transcript_30769.p1


Annotated TAIR IDAT4G20380.8
Annotated Gene NameLSD1 zinc finger family protein
Annotated Gene Symbol(s)LSD1
Annotation TypeOrtholog
Chromosome Positionchr4:11005027-11006438 | Forward length=210
E-Value2.4E-68
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 129.829957428444
Replicate 226.305633703191
Replicate 331.514785285713
Condition 2: 8 Hour
Replicate 141.127538468756
Replicate 237.245440317787
Replicate 332.793611699971
Condition 3: 24 Hour
Replicate 123.645285976083
Replicate 225.403393195466
Replicate 326.607871020782


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_30769.p1 GENE.S_Transcript_30769~~S_Transcript_30769.p1 ORF type:complete len:182 (+),score=16.51,zf-LSD1|PF06943.8|3.4e-13,zf-LSD1|PF06943.8|1.9e-09,zf-LSD1|PF06943.8|4.9e-13 S_Transcript_30769:359-904(+)
ATGCAGAACCAGCTTCTTTGCAGCGGTTGTAGGACTATACTTTTATACCCTAGAGGAGCAGCAAACGTCCGTTGTGCTGTGTGTAATACAATTACTCCTGTTCACCCTACTGGATTGGAAATGGATCGGATTATATGTGGGTGTTGTCATACATTACTAATGTACTCACGTGGGGCAACCAGTGTGAGATGCCTTTGTTGTCAGACAGTGAATCTCACGAGTACGAATGCTTCTCCAGCACAAAACCAGGTAGCCACAGTCCGTTGTGGAAGTTGTCAGATGACACTTATGTATCCTTATGGAGCACCATCAGTCAAATGTGCTGTTTGTCACTATATCACGAATGTTGGAACAACCAACAGCCGGGTATCAAATCCCATCTATAGACCTCATGGAGCAGGCAACATGCCAACAGTTCCATCTTCTTCAGCGCCAACCCCACATGGCCAAACTCAAACTGTGGTTGTAGAGAATCCGATGTCTTTTGATGAAAGTGGTAAATTGGTTAGTAATGTTGTTGTTGGTGTAACTACAGAAAAGAAATAA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_30769.p1 GENE.S_Transcript_30769~~S_Transcript_30769.p1 ORF type:complete len:182 (+),score=16.51,zf-LSD1|PF06943.8|3.4e-13,zf-LSD1|PF06943.8|1.9e-09,zf-LSD1|PF06943.8|4.9e-13 S_Transcript_30769:359-904(+)
MQNQLLCSGCRTILLYPRGAANVRCAVCNTITPVHPTGLEMDRIICGCCHTLLMYSRGATSVRCLCCQTVNLTSTNASPAQNQVATVRCGSCQMTLMYPYGAPSVKCAVCHYITNVGTTNSRVSNPIYRPHGAGNMPTVPSSSAPTPHGQTQTVVVENPMSFDESGKLVSNVVVGVTTEKK*

Click here to download the sequence:
Link to NCBI Protein BLAST