Transcript Information: S_Transcript_30792.p1


Annotated TAIR IDAT1G05600.1
Annotated Gene NameTetratricopeptide repeat (TPR)-like superfamily protein
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr1:1672161-1673675 | Forward length=504
E-Value8.2E-209
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 14.9635359446567
Replicate 24.7715159955736
Replicate 34.6472767512247
Condition 2: 8 Hour
Replicate 17.8700845217991
Replicate 28.7889405370355
Replicate 37.9511495034454
Condition 3: 24 Hour
Replicate 13.1640406643123
Replicate 24.4518201310682
Replicate 34.7541551954088


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_30792.p1 GENE.S_Transcript_30792~~S_Transcript_30792.p1 ORF type:complete len:504 (+),score=86.77,PPR_1|PF12854.3|23,PPR_1|PF12854.3|0.45,PPR_1|PF12854.3|1.2e+04,PPR_1|PF12854.3|0.045,PPR_1|PF12854.3|3.6e-07,PPR_1|PF12854.3|3e-08,PPR_1|PF12854.3|18,PPR_1|PF12854.3|8.4e-06,PPR_1|PF12854.3|1.7e-08,PPR_1|PF12854.3|0.00015,PPR_1|PF12854.3|0.12,PPR_2|PF13041.2|3.6e+03,PPR_2|PF13041.2|0.16,PPR_2|PF13041.2|0.83,PPR_2|PF13041.2|22,PPR_2|PF13041.2|2.2e-10,PPR_2|PF13041.2|1.5e-05,PPR_2|PF13041.2|58,PPR_2|PF13041.2|5.3e-05,PPR_2|PF13041.2|5.2e-09,PPR_2|PF13041.2|6.2e-10,PPR_2|PF13041.2|2.6e-05,PPR_2|PF13041.2|0.021,PPR|PF01535.16|9.4e+02,PPR|PF01535.16|0.016,PPR|PF01535.16|0.053,PPR|PF01535.16|1.7e+02,PPR|PF01535.16|0.0012,PPR|PF01535.16|0.011,PPR|PF01535.16|2.6e-05,PPR|PF01535.16|0.11,PPR|PF01535.16|1.8,PPR|PF01535.16|0.001,PPR|PF01535.16|0.96,PPR|PF01535.16|0.0066,PPR_3|PF13812.2|2.8,PPR_3|PF13812.2|9.3,PPR_3|PF13812.2|2.8e+03,PPR_3|PF13812.2|0.0021,PPR_3|PF13812.2|0.39,PPR_3|PF13812.2|0.088,PPR_3|PF13812.2|6.5,PPR_3|PF13812.2|0.65,PPR_3|PF13812.2|0.52,PPR_3|PF13812.2|2.6e+03,PPR_3|PF13812.2|2.7,TPR_19|PF14559.2|29,TPR_19|PF14559.2|3.8e+02,TPR_19|PF14559.2|1.4e+03,TPR_19|PF14559.2|2.3,TPR_19|PF14559.2|51,TPR_19|PF14559.2|8.3e+02 S_Transcript_30792:544-2055(+)
ATGGTTATAAGGTGGCCAAGGCTTCTGAATCCCACCCAGCTATCACAGATCATAAGACAGCAGAAAAACCCCTTGACAGCATTAGAGATCTTCAATGAAGCCAAATCCAAATATCCTTCCTATCGTCACAATGGTGCTGTTTATGCCACCATGATCAACATCCTTGGGAGCTCAGGTCGATTATTTGAGATGAAACAAGTCATTGAACAGATGAAACATGACTCCTGCGAGTGCAAAGATCCAGTCTTTGCAGCTATTTTCAAGACTTATGCAAAGGCTGGGATGCTTGATGATGCTGTCTCTCTCTTTAGAAGCCTTCCCCAATTTAATTGTGTGAACTGGACATTGTCGTTCAACACCCTTCTACAGATATTGGTTAAAGAGTCAAAGCTTGAAACCTTCTGTCATTTGTTGATGGAGAAATCTAGTGGATGGGAAGTCAAATCTAGACTTGGTTCATTTAATTTGCTAATGGATGCTCTATGCCATATTAACCAATCAGACCTAGCATTGCAGGTTTTCCAGGAGATGAGCTACCACTGCTGTTATCCAGACAGGGAAAGTTATAAGATACTTATGAAGGGCCTTTGTCGCGATGGCAGGCTAAATGATGCCACACATTTGTTGTACGCTATGCTGTGGAGGATTTCTCAGAAAGGTTGTGGTGAAGATGTTGTAATTTATAGGACTCTCATAGATAGTTTATGTGACAATGGACAGGTTAATGAGGCTCTAGAAATTCTCGGAAAAGTTTTGAGGAAGGGCCTCAGGGCTCCCAAGAGCCGTTGCAAACTAACAGATCTTGACCAACTCTGTGATACGGAAGGTACAGAACATGCCAAAGTTTTGATTAATGAGGCTTTAATTAGAGGTGCCATCCCCAGTTCAGCTAGTTACACAGCTGTGGCTACTGATCTTTACACAGAAGGTAAAATATGTGAAGCCAACAAAGTACTCGATGAAATGCGTGAAAGAGGTTTCAGACCGACAGTAAGGGTATATGAAACGAAGGTAGAAGCAATGTGCAGAGCTGGTAGAGTTGATGAAGCTAGCAAGGTAATAGAGGAGGATATGCTGAGGAAGGATTGTGTACCAGATTCCAAAGTCTACAGCATTGTCGTGAAAGGCTTTTGTAATGAGGGTAAGTTGGATTTAGCCATTAGGTTTCTTGAGAAGATGGATAGGCAGAAAGGTTGTGCCCCTGACAAGGAGACATTCAGCTTCATTGTTGATCGATTGTGCCAGGATGGGAAGTTTGTTGACGCTAGTATAATATTGGAAAGGATGTTATGCAAATCGTATTGGCCTGAACCTGATACTTTCGATGCTCTTATCAAAGGCCTTTGCTCCATTAACAAAATATATGAAGCTGTTTTGTGGCTGCAAGAGATGATTAGTCAGGGTAAGGTGCCTGAGTCTTCTATATGGAGTGTCTTAGTAGCATCAGTTAGCTGTAAAATGGAAGGTACTGCTACTAGTCATCTGCTGGATCAGCTGAGGAGCACTTCTTGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_30792.p1 GENE.S_Transcript_30792~~S_Transcript_30792.p1 ORF type:complete len:504 (+),score=86.77,PPR_1|PF12854.3|23,PPR_1|PF12854.3|0.45,PPR_1|PF12854.3|1.2e+04,PPR_1|PF12854.3|0.045,PPR_1|PF12854.3|3.6e-07,PPR_1|PF12854.3|3e-08,PPR_1|PF12854.3|18,PPR_1|PF12854.3|8.4e-06,PPR_1|PF12854.3|1.7e-08,PPR_1|PF12854.3|0.00015,PPR_1|PF12854.3|0.12,PPR_2|PF13041.2|3.6e+03,PPR_2|PF13041.2|0.16,PPR_2|PF13041.2|0.83,PPR_2|PF13041.2|22,PPR_2|PF13041.2|2.2e-10,PPR_2|PF13041.2|1.5e-05,PPR_2|PF13041.2|58,PPR_2|PF13041.2|5.3e-05,PPR_2|PF13041.2|5.2e-09,PPR_2|PF13041.2|6.2e-10,PPR_2|PF13041.2|2.6e-05,PPR_2|PF13041.2|0.021,PPR|PF01535.16|9.4e+02,PPR|PF01535.16|0.016,PPR|PF01535.16|0.053,PPR|PF01535.16|1.7e+02,PPR|PF01535.16|0.0012,PPR|PF01535.16|0.011,PPR|PF01535.16|2.6e-05,PPR|PF01535.16|0.11,PPR|PF01535.16|1.8,PPR|PF01535.16|0.001,PPR|PF01535.16|0.96,PPR|PF01535.16|0.0066,PPR_3|PF13812.2|2.8,PPR_3|PF13812.2|9.3,PPR_3|PF13812.2|2.8e+03,PPR_3|PF13812.2|0.0021,PPR_3|PF13812.2|0.39,PPR_3|PF13812.2|0.088,PPR_3|PF13812.2|6.5,PPR_3|PF13812.2|0.65,PPR_3|PF13812.2|0.52,PPR_3|PF13812.2|2.6e+03,PPR_3|PF13812.2|2.7,TPR_19|PF14559.2|29,TPR_19|PF14559.2|3.8e+02,TPR_19|PF14559.2|1.4e+03,TPR_19|PF14559.2|2.3,TPR_19|PF14559.2|51,TPR_19|PF14559.2|8.3e+02 S_Transcript_30792:544-2055(+)
MVIRWPRLLNPTQLSQIIRQQKNPLTALEIFNEAKSKYPSYRHNGAVYATMINILGSSGRLFEMKQVIEQMKHDSCECKDPVFAAIFKTYAKAGMLDDAVSLFRSLPQFNCVNWTLSFNTLLQILVKESKLETFCHLLMEKSSGWEVKSRLGSFNLLMDALCHINQSDLALQVFQEMSYHCCYPDRESYKILMKGLCRDGRLNDATHLLYAMLWRISQKGCGEDVVIYRTLIDSLCDNGQVNEALEILGKVLRKGLRAPKSRCKLTDLDQLCDTEGTEHAKVLINEALIRGAIPSSASYTAVATDLYTEGKICEANKVLDEMRERGFRPTVRVYETKVEAMCRAGRVDEASKVIEEDMLRKDCVPDSKVYSIVVKGFCNEGKLDLAIRFLEKMDRQKGCAPDKETFSFIVDRLCQDGKFVDASIILERMLCKSYWPEPDTFDALIKGLCSINKIYEAVLWLQEMISQGKVPESSIWSVLVASVSCKMEGTATSHLLDQLRSTS*

Click here to download the sequence:
Link to NCBI Protein BLAST