Transcript Information: S_Transcript_307969.p1


Annotated TAIR IDAT5G13090.1
Annotated Gene Nameunknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G24270.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink).
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr5:4153758-4154567 | Reverse length=269
E-Value4.1E-48
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 13.5548052191396
Replicate 22.2301736736838
Replicate 32.1305687894412
Condition 2: 8 Hour
Replicate 12.2326220909634
Replicate 22.2614143029326
Replicate 31.0773352580135
Condition 3: 24 Hour
Replicate 11.3406607196394
Replicate 21.3909198440358
Replicate 31.5479233028411


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_307969.p1 GENE.S_Transcript_307969~~S_Transcript_307969.p1 ORF type:complete len:277 (-),score=62.38 S_Transcript_307969:160-969(-)
ATGAAGCTCAACAAAGGTAAAAACAAAGGCAAGGTCCACCCTTCCCCTTCTTCATCTTCTTCACCTTCTTCGTTTTCTCTCTCCTCAAGCTCAAACTCGACAGACCCAATATCAGCTTTAAACATTCTCTTACCAGCAGCTATACTGACCCTCATCTCAGCTCTCTCTCTCTCTGACCGTGAAGTTTTTGCTTACATGATTTCTCGCTCTCTCAAATCCCCACCTTCCTTTATTGCTCCTCCCATCACCACCAAAAGAAAATCCAAGAAATCTTCTCCTTCTTTTTCTTCTTCATCATCATCTTGTTGTTTATCTTCTTCAGCTCAACACCAGACCCAAAAGTCCCCAGCCTTTGACTGCGACTGTTTCGACTGTTACACAGCCTACTGGGTTCGCTGGGACTCTTCTCCTCACCGTGAGCTCATCCACCAAGCGATTGAAGCCTTCGAGGAACACTTGGCCTCTTCTGAGCTGCTTCTTCCCAAGAAGAAGGAAAGAAGTCGCTCCAGGAAAGATAAAGACCCCAAAAGCCGCCAAATCACTCAAGAGCAAAAAGTTGTTATTGAAGAAAACGAAGAAAAGTCGGCAGTGAATGAGTCTTTGCCTGAAGAAGTCGCCACCGCCATAAGCGATGTTAAGGAGGCTGACGTAAGTGGGGGCCACCAGGAGATAGAGGAAAAAGAAGAAGAGGAGCAACAGCAGAAGCAGCAGGTGCAGCAACAACACAAGGGGTTGGCGAGGAAGGTTTTGCCGGACGTGATTGGGTTGTTCAATTCTCGTTTATGGAATCTTTGGGGTCCGAATGTGTGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_307969.p1 GENE.S_Transcript_307969~~S_Transcript_307969.p1 ORF type:complete len:277 (-),score=62.38 S_Transcript_307969:160-969(-)
MKLNKGKNKGKVHPSPSSSSSPSSFSLSSSSNSTDPISALNILLPAAILTLISALSLSDREVFAYMISRSLKSPPSFIAPPITTKRKSKKSSPSFSSSSSSCCLSSSAQHQTQKSPAFDCDCFDCYTAYWVRWDSSPHRELIHQAIEAFEEHLASSELLLPKKKERSRSRKDKDPKSRQITQEQKVVIEENEEKSAVNESLPEEVATAISDVKEADVSGGHQEIEEKEEEEQQQKQQVQQQHKGLARKVLPDVIGLFNSRLWNLWGPNV*

Click here to download the sequence:
Link to NCBI Protein BLAST