Transcript Information: S_Transcript_307970.p1


Annotated TAIR IDAT5G13090.1
Annotated Gene Nameunknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G24270.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink).
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr5:4153758-4154567 | Reverse length=269
E-Value5E-08
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 15.1509034648736
Replicate 24.9819202226646
Replicate 32.3797078817549
Condition 2: 8 Hour
Replicate 12.7516632667268
Replicate 21.924460098041
Replicate 32.979634611449
Condition 3: 24 Hour
Replicate 13.7582595252635
Replicate 23.655453480056
Replicate 32.1696382283971


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_307970.p1 GENE.S_Transcript_307970~~S_Transcript_307970.p1 ORF type:5prime_partial len:93 (-),score=27.13 S_Transcript_307970:160-438(-)
GTAAGTGGGGGCCACCAGGAGGTAGGGGAAGAAGAAGAGGAAGAAAAGTTGCCAGTGAAAGAGGAGTCTTTGCCTGAGGAAGTCGCCACCGTGGTAAGCGATGTTAAAGAGGCTGACGTAAGTGGGGGCCACCAGGAGATAGAGGAAAAAGAAGAAGAGGAGCAACAGCAGAAGCAGCAGGTGCAGCAACAACACAAGGGGTTGGCGAGGAAGGTTTTGCCGGACGTGATTGGGTTGTTCAATTCTCGTTTATGGAATCTTTGGGGTCCGAATGTGTGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_307970.p1 GENE.S_Transcript_307970~~S_Transcript_307970.p1 ORF type:5prime_partial len:93 (-),score=27.13 S_Transcript_307970:160-438(-)
VSGGHQEVGEEEEEEKLPVKEESLPEEVATVVSDVKEADVSGGHQEIEEKEEEEQQQKQQVQQQHKGLARKVLPDVIGLFNSRLWNLWGPNV*

Click here to download the sequence:
Link to NCBI Protein BLAST