Transcript Information: S_Transcript_308427.p1


Annotated TAIR IDAT2G38080.1
Annotated Gene NameLaccase/Diphenol oxidase family protein
Annotated Gene Symbol(s)IRX12, LAC4, ATLMCO4, LMCO4
Annotation TypeOrtholog
Chromosome Positionchr2:15934540-15937352 | Forward length=558
E-Value1.9E-292
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10.73037396185744
Replicate 20.26490484888954
Replicate 30.22143936978594
Condition 2: 8 Hour
Replicate 10.80473171008049
Replicate 20.57560502503585
Replicate 30.29249876644914
Condition 3: 24 Hour
Replicate 11.273972622093
Replicate 20.5442424735315
Replicate 30.8652502368822


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_308427.p1 GENE.S_Transcript_308427~~S_Transcript_308427.p1 ORF type:5prime_partial len:583 (+),score=50.26,Cu-oxidase|PF00394.18|1.1e-42,Cu-oxidase|PF00394.18|54,Cu-oxidase_2|PF07731.10|19,Cu-oxidase_2|PF07731.10|21,Cu-oxidase_2|PF07731.10|3.9e-40,Cu-oxidase_3|PF07732.11|8.9e-41,Cu-oxidase_3|PF07732.11|9.2e+02,Cu-oxidase_3|PF07732.11|1.3e+03 S_Transcript_308427:1-1749(+)
CAAAAGAAAACTAATTTAGCGAAAATATCACTGATACCAGGAATTGAAGGAAAAAAAAAAAAGATCAGATCAGTGAAAATGAAGCCTTGGCTTTGGGCACTGGTTGTCTTTCTTTTGTTTCCAGCATTAGCTGAAGCCATGGTTAGACATTACAAGTTCCAGGTTGTAATGAAGAATTTTACAAAGCTCTGCTCTACCAAGCCAATTGTGACAGTCAATGGCAAATTTCCGGGGCCAACCCTGCGTGCAAGGGAGGACGATACCGTTCTTGTAAATGTGATCAATCATGTGAACTACAATGTCACAATACACTGGCATGGAATTCGACAACTTCGTACAGGCTGGTCAGATGGTCCAGCATACATAACACAATGCCCAATACAACCACGGCAAGGCTATCTTTATAACTTTACTATTACAGGTCAAAGAGGCACCCTCCTTTGGCATGCACATATTTCATGGCTACGGGCCACCGTACATGGGGCCATTGTCATCTTGCCAAAGAAGGGTGTCCCGTACCCATTTCCTAAGCCTGCCAAGGAAAAATTAATTGTCTTAGGCGAATGGTGGAAAGCAGACACTGAAGCTGTGATTAATCAAGCTATGCAATCCGGCATGACACCAAATGTGTCAGATTCACATACCATCAATGGCCATACTGGACCAGTTCGGAATTGTTCTATATCTCCACAGGGAACTTACACATTACACATTGAACACAATAAGAGATACTTACTCCGTATAATCAACGCTGCAGTCAATGACGAGTTCTTCATCAAAATAGCAGGACATTTGTTCACAGTCGTCGAAGTTGATGCAAGCTACACCAAACCATTCACAACGGACACAATTTACATAGCCCCAGGACAAACCACAAATGCCCTTTTAACAGCTAATCAAGAACCAGCCAAATACTTGATTGGCTTATCTTCCTTCATGGATGTACCAACAGTTGCTGTTGACAACATAACAAACTATGGCTTCTTACGTTATAAAGGCCAAAAAATTGGATCTCCCTTAGCCATTACAGCCATGCCACCACTAAACGCTACAGCTTCCCAATTAAATTTCACTCATTCTCTTCGAAGCCTAAATTCGGACCAATATCCATCCAAAGTGCCATTAACCATTGATCATTCCCTGATTTTCACCATGAGTGTTGGGGTTAACCCTTGTTCAACTTGTCTTAATGGTAGTAGGCTTGTAGGAGATTTTAACAATGTCACTTTTATAATGCCTACTATTGCACTTCTCAAAGCTCATTATCATAACATAAGTGGAGTTTTTACTGACGATTTTCCTGCAAAACCTCCAATGAGTTACAACTTTACTGGGAATTATACTGGGGGTTTGGTCACCTTGAATGGGACTAAAGTTTATAGGTTACCTTTTAATGCTACGGTCCAACTTGTGCTTCAAGGTACTACTCTCATTGCACCTGAAAGCCATCCGACCCATTTGCATGGATCCAATTTCTTTGTGGTTGGTACGGGCCGAGGGAATTATGATCCAAGTAAGGATCCAGATAATTTCAATCTTGTTGATCCTGTTGAGAGAAACACTATTGATGTGCCTACCAGTGGATGGACTGCCATCAGATTCCGGGCAGATAATCCAGGTATATGGTTCTTGCATTGCCATCTAGAAATACATACATCATGGGGACTAAAGATGGCATTCTTAGTAGAAAACGGCAAAGGCCCTAATGAGTCTCTCTTACCACCTCCAAAGGACTACCCCAAATGCTAA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_308427.p1 GENE.S_Transcript_308427~~S_Transcript_308427.p1 ORF type:5prime_partial len:583 (+),score=50.26,Cu-oxidase|PF00394.18|1.1e-42,Cu-oxidase|PF00394.18|54,Cu-oxidase_2|PF07731.10|19,Cu-oxidase_2|PF07731.10|21,Cu-oxidase_2|PF07731.10|3.9e-40,Cu-oxidase_3|PF07732.11|8.9e-41,Cu-oxidase_3|PF07732.11|9.2e+02,Cu-oxidase_3|PF07732.11|1.3e+03 S_Transcript_308427:1-1749(+)
QKKTNLAKISLIPGIEGKKKKIRSVKMKPWLWALVVFLLFPALAEAMVRHYKFQVVMKNFTKLCSTKPIVTVNGKFPGPTLRAREDDTVLVNVINHVNYNVTIHWHGIRQLRTGWSDGPAYITQCPIQPRQGYLYNFTITGQRGTLLWHAHISWLRATVHGAIVILPKKGVPYPFPKPAKEKLIVLGEWWKADTEAVINQAMQSGMTPNVSDSHTINGHTGPVRNCSISPQGTYTLHIEHNKRYLLRIINAAVNDEFFIKIAGHLFTVVEVDASYTKPFTTDTIYIAPGQTTNALLTANQEPAKYLIGLSSFMDVPTVAVDNITNYGFLRYKGQKIGSPLAITAMPPLNATASQLNFTHSLRSLNSDQYPSKVPLTIDHSLIFTMSVGVNPCSTCLNGSRLVGDFNNVTFIMPTIALLKAHYHNISGVFTDDFPAKPPMSYNFTGNYTGGLVTLNGTKVYRLPFNATVQLVLQGTTLIAPESHPTHLHGSNFFVVGTGRGNYDPSKDPDNFNLVDPVERNTIDVPTSGWTAIRFRADNPGIWFLHCHLEIHTSWGLKMAFLVENGKGPNESLLPPPKDYPKC*

Click here to download the sequence:
Link to NCBI Protein BLAST