Transcript Information: S_Transcript_308615.p1


Annotated TAIR IDAT1G11290.1
Annotated Gene NamePentatricopeptide repeat (PPR) superfamily protein
Annotated Gene Symbol(s)CRR22
Annotation TypeHomolog
Chromosome Positionchr1:3791454-3793883 | Reverse length=809
E-Value3E-71
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10.2087294214524
Replicate 20.12978111504421
Replicate 30.14464891045961
Condition 2: 8 Hour
Replicate 10.16725796327163
Replicate 20.30706458917272
Replicate 30.83591559235221
Condition 3: 24 Hour
Replicate 10.085666209767036
Replicate 20.044438846228132
Replicate 30.098909978059279


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_308615.p1 GENE.S_Transcript_308615~~S_Transcript_308615.p1 ORF type:3prime_partial len:510 (+),score=56.42,PPR_2|PF13041.2|29,PPR_2|PF13041.2|0.0052,PPR_2|PF13041.2|0.00012,PPR_2|PF13041.2|38,PPR_2|PF13041.2|2.4e-08,PPR_2|PF13041.2|0.41,PPR_2|PF13041.2|1.7e-07,PPR_2|PF13041.2|0.021,PPR|PF01535.16|2.7e+03,PPR|PF01535.16|3.2e+03,PPR|PF01535.16|0.17,PPR|PF01535.16|0.00095,PPR|PF01535.16|19,PPR|PF01535.16|0.0033,PPR|PF01535.16|0.087,PPR|PF01535.16|5.7e-05,PPR|PF01535.16|4.4,PPR|PF01535.16|4.9,PPR_1|PF12854.3|0.0063,PPR_1|PF12854.3|2.3,PPR_1|PF12854.3|1.8e+02,PPR_1|PF12854.3|4.6e+02,PPR_1|PF12854.3|21,PPR_1|PF12854.3|24,PPR_1|PF12854.3|0.75,PPR_1|PF12854.3|2,PPR_1|PF12854.3|4.6e+03,PPR_1|PF12854.3|7.9e+02,PPR_1|PF12854.3|22,PPR_3|PF13812.2|6.9e+02,PPR_3|PF13812.2|36,PPR_3|PF13812.2|5.1e+03,PPR_3|PF13812.2|4.3e+03,PPR_3|PF13812.2|0.6,PPR_3|PF13812.2|2.1,PPR_3|PF13812.2|0.17,PPR_3|PF13812.2|59,PPR_3|PF13812.2|1.7e+03 S_Transcript_308615:88-1614(+)
ATGTTCCTCAATCTCAAACAATGTTTATTTCGTGTTCCTCCTCTAAATTGCAGAAATTTGACTAGTCTTTCTTCTAATAACTGTTCCCTTCTACCCATAATCAAAGTTATTAAACATTGCAATAGGCTTGAGGATTTGAAGCCCCTCAAGTCGCTCATTATAGTCAAAGGTCTAACTGATCATAAGCTTTTAATATGTGAATTCATTTCCCGATGTTTCGATCTGGGTAACCCAGAATTTGCGTTGTCAGCCTTTTATTTCTCACAAAATCGCAGCTTGCTTTTACAGAATTTGATTTTTAAGCGTCTCTCTAACTTGGGGTTATACCAACATGTACTAGCTGTGTATAAAACATGTCGCCTTTCAGGTTGTCCTGGTGGTGATTATACATTTCCTTACGTAATCAAAGCTTGTTCATCTTTAAATGATGTAGCATCAGGGAATGAGATTCATGGTGTTGTTTTGAGAACTGGGTATGACAAAAATGTTGTCATACAAACTTCTTTTATTGACTTTTATGCGAAAATTGGACGTATGGATATTGCACGCCAGGTGTTCGATGGAATGTCTGAGTGGGATGTTGTCTCCTGGAATGCTTTGGTATCGGGTTATTCGTTTAATGGGCTTGATTATGAGGCAGTTGGAATTTTGTATAACATGTGGGTGAAGGGTGTAAAGCCTAATGTGAGCACTTTGGCTAGTATTGTTCCTGTATGTACCCGTTCAGAGCTTCTTAATCTGGGTATGTCTTTGCATGGTTATGCTTGGAAATGTGGACTTGATCAAGATGAGTTGTTGACTCCTGCTTTGATTTCAATGTATTCTAGTGATGGAGATATTTCTGCTGCTAGATGCTTGTTTGAGGTTTCACCTATAAAAAATGTGGTCATTTGGAACTCAATGATCTATGCTAACACCCTAAACCAGATGCCTCAACAGGCCATTGAAATGTTCCAACATATGGTTTGTTCTGGTTTTAAGCCTAATACTGTGACGTTTGTGTCTGTGATCCCGTGTTGTGAGAAGATGAATAGTATACACTTGGGTGAATGCCTTCATGGATTTGTGATGAAGTATGGGATGGATGACCAAGTTTCTGTAGCAACAGCTCTGGTGTCTATGTATGCCAAGCTAGGAGATATTAATTCAGCTGTATATCTTTTCACCCAGATGCCTCATGAAAACCTTCTTACTTGGAATTCAATAATTTCGGGATATGTACATCACGGACTTCTGCACACTTGTTTGGATGCAGTTCATGAGATGCAATTAGCAGGATTTGTGCCAGACTCTATTACCATAATTAGTATTCTTTCTGCCTGCTCGGAGCTGGAGTTATTGGTGCTTGGGAAGTCTGCTCATGCCATCAGCATAAGGAAAGGTTTTGATTCAAATATTAATGTATCAAACATTCTCGTAGCATTTTATTATAATTGTGATCAGCTGCACTCATCTTTCAAGCTTTTCAATAGAATGACCCAAAAAAATTTGATATCATGGAATACAATGATAAGTGGATGTATACAC

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_308615.p1 GENE.S_Transcript_308615~~S_Transcript_308615.p1 ORF type:3prime_partial len:510 (+),score=56.42,PPR_2|PF13041.2|29,PPR_2|PF13041.2|0.0052,PPR_2|PF13041.2|0.00012,PPR_2|PF13041.2|38,PPR_2|PF13041.2|2.4e-08,PPR_2|PF13041.2|0.41,PPR_2|PF13041.2|1.7e-07,PPR_2|PF13041.2|0.021,PPR|PF01535.16|2.7e+03,PPR|PF01535.16|3.2e+03,PPR|PF01535.16|0.17,PPR|PF01535.16|0.00095,PPR|PF01535.16|19,PPR|PF01535.16|0.0033,PPR|PF01535.16|0.087,PPR|PF01535.16|5.7e-05,PPR|PF01535.16|4.4,PPR|PF01535.16|4.9,PPR_1|PF12854.3|0.0063,PPR_1|PF12854.3|2.3,PPR_1|PF12854.3|1.8e+02,PPR_1|PF12854.3|4.6e+02,PPR_1|PF12854.3|21,PPR_1|PF12854.3|24,PPR_1|PF12854.3|0.75,PPR_1|PF12854.3|2,PPR_1|PF12854.3|4.6e+03,PPR_1|PF12854.3|7.9e+02,PPR_1|PF12854.3|22,PPR_3|PF13812.2|6.9e+02,PPR_3|PF13812.2|36,PPR_3|PF13812.2|5.1e+03,PPR_3|PF13812.2|4.3e+03,PPR_3|PF13812.2|0.6,PPR_3|PF13812.2|2.1,PPR_3|PF13812.2|0.17,PPR_3|PF13812.2|59,PPR_3|PF13812.2|1.7e+03 S_Transcript_308615:88-1614(+)
MFLNLKQCLFRVPPLNCRNLTSLSSNNCSLLPIIKVIKHCNRLEDLKPLKSLIIVKGLTDHKLLICEFISRCFDLGNPEFALSAFYFSQNRSLLLQNLIFKRLSNLGLYQHVLAVYKTCRLSGCPGGDYTFPYVIKACSSLNDVASGNEIHGVVLRTGYDKNVVIQTSFIDFYAKIGRMDIARQVFDGMSEWDVVSWNALVSGYSFNGLDYEAVGILYNMWVKGVKPNVSTLASIVPVCTRSELLNLGMSLHGYAWKCGLDQDELLTPALISMYSSDGDISAARCLFEVSPIKNVVIWNSMIYANTLNQMPQQAIEMFQHMVCSGFKPNTVTFVSVIPCCEKMNSIHLGECLHGFVMKYGMDDQVSVATALVSMYAKLGDINSAVYLFTQMPHENLLTWNSIISGYVHHGLLHTCLDAVHEMQLAGFVPDSITIISILSACSELELLVLGKSAHAISIRKGFDSNINVSNILVAFYYNCDQLHSSFKLFNRMTQKNLISWNTMISGCIH

Click here to download the sequence:
Link to NCBI Protein BLAST