Transcript Information: S_Transcript_308993.p1


Annotated TAIR IDAT5G41790.1
Annotated Gene NameCOP1-interactive protein 1
Annotated Gene Symbol(s)CIP1
Annotation TypeHomolog
Chromosome Positionchr5:16727530-16732391 | Forward length=1586
E-Value0.0005
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 11.2051170370648
Replicate 20.416279048255
Replicate 30.48716661352907
Condition 2: 8 Hour
Replicate 10.72425853907244
Replicate 20.084422070338591
Replicate 30.48262296464109
Condition 3: 24 Hour
Replicate 10.57703465824211
Replicate 20.25657145180771
Replicate 30.57106515634225


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_308993.p1 GENE.S_Transcript_308993~~S_Transcript_308993.p1 ORF type:complete len:265 (+),score=76.61 S_Transcript_308993:167-961(+)
ATGCCTTACTTCTTCCCGAAAGTAACATCATTACATTTGATTTCCCAATTCTCCTTTCTTCAAGGTTCCCCAAGAGAGAAACCTCCGTCTTCATCTTCTTGCAAGAACTCTTCAGATCTGGAAGTCAAAACCTTCAGCAGGACCAAAAACGGTGACGCTCGTATTGCTGCTTTCTTGGAGATTGCTGAGGAAGACAGGACTTACCCTCAGTGCATATCAGGCATCGTCATAACCAACAATACCGTTCTTCAGAGCCTAGAAATTTCTGAAATGTCTCAGAGTTCTCAACATACCCATTCTTCCATGAGAAAGATGACCCTGGATGAACAACTCAAGAAACTGAAAGGCGAAGTCCAGAGTGGCCCTGTAGATAGCAAGGCTGCTGTTAAGAAGTTTATCCCTGCCCCTCCCCAAAAGCGAGCAAAGAGGGAGTTCGAGGATGTGACTTTTCTAGGGGAGATCACAGCTGAGACTTGCTCGCGTCTGGAGTCTCTACTTCTGGGGAGTTCTGATGGGCAATATGCTGGCTCGTCCACAGCAAAGGTTCTAGAAGAAGCTTCCTTTGCTCAACTGAAGAGTCTGCAGGCCAATTTGGTGGCCTCAAGGAGGATCAAGGACCTTGAGGCTGAAATTATTTCCTTGAAAACTGCAAAGAGGTCTGCAGAGGAAAAACTTCAGAGGGCTGAAAAGAGTCTCCAGAAAGCTGAGGAGGACCTTCAGAAAGCTGAGGAGGATAAAGCTTTTCCTGACAAGCAGCATGAGGAAGCTATAACAGAGCTTCAGAACGAACTATAG

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_308993.p1 GENE.S_Transcript_308993~~S_Transcript_308993.p1 ORF type:complete len:265 (+),score=76.61 S_Transcript_308993:167-961(+)
MPYFFPKVTSLHLISQFSFLQGSPREKPPSSSSCKNSSDLEVKTFSRTKNGDARIAAFLEIAEEDRTYPQCISGIVITNNTVLQSLEISEMSQSSQHTHSSMRKMTLDEQLKKLKGEVQSGPVDSKAAVKKFIPAPPQKRAKREFEDVTFLGEITAETCSRLESLLLGSSDGQYAGSSTAKVLEEASFAQLKSLQANLVASRRIKDLEAEIISLKTAKRSAEEKLQRAEKSLQKAEEDLQKAEEDKAFPDKQHEEAITELQNEL*

Click here to download the sequence:
Link to NCBI Protein BLAST