Transcript Information: S_Transcript_309319.p1


Annotated TAIR IDAT3G21470.1
Annotated Gene NamePentatricopeptide repeat (PPR-like) superfamily protein
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr3:7563503-7565074 | Forward length=523
E-Value3E-66
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10
Replicate 20.36925170807556
Replicate 30.15433251952804
Condition 2: 8 Hour
Replicate 10.62459302184071
Replicate 20.74884849003269
Replicate 30.44593823441384
Condition 3: 24 Hour
Replicate 10
Replicate 20.094827663499361
Replicate 30.42212626619441


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_309319.p1 GENE.S_Transcript_309319~~S_Transcript_309319.p1 ORF type:5prime_partial len:239 (+),score=44.55,PPR|PF01535.16|0.028,PPR|PF01535.16|9.5e-07,PPR|PF01535.16|0.00027,PPR|PF01535.16|0.014,PPR|PF01535.16|0.4,PPR_2|PF13041.2|1.3,PPR_2|PF13041.2|3.4e-09,PPR_2|PF13041.2|0.02,PPR_2|PF13041.2|0.51,PPR_2|PF13041.2|0.54,PPR_1|PF12854.3|0.15,PPR_1|PF12854.3|0.0021,PPR_1|PF12854.3|4,PPR_1|PF12854.3|0.0013,PPR_3|PF13812.2|61,PPR_3|PF13812.2|13,PPR_3|PF13812.2|0.03,PPR_3|PF13812.2|0.14,PPR_3|PF13812.2|0.8 S_Transcript_309319:1-717(+)
TTGGATGTCGGTAAAGAGGTCCATGAAATGATCTTTGAAAAGGGAATAAAGCTTAACCAGTTTGTAATAAATGGTTTAGTGGACATGTATGCAAAATGTGGGGATTTGGGGACGGCTAGATCAATTTTTGAAGGAATGTCTCAAAGAAATGCTACCTGCTGGAATTCAATGATATGTGGTTTTGCTGTTCATGGAAAATGTCAGGATGCTGTTAACTTCTTTCATGAAATGGAGGTTACGGGTGTGATACCGGATGAGATTTCATTCCTATCTGTTCTTTCGGCTTGTGCTCATGGTGGTCTTGTACAAGAGGGTTTGAATATATTCTCAAAGATGAAGAAATATGGAGTAGAAGCAGGTGTTAAGCATTATGGTTGCATAGTTGATCTGCTTGGAAGAGCAGGAAGGTTGAAAGAGGCGTTTGCTTTAGTCAAGAGTATGCCAATGAAACCAAACGATACAATTTGGGGGTGTTTGCTTGGAGCTTGTCGCCTGCACTCAGAAGCGACCTTGGGAGAGGACGCACTGGAAGACATTAGCCACAGAGATTATGGAAAGGGTTCCCATTATGTTCTCCTATCTAACATTTATGCTTCTTCAGACCGATGGGAGAAGGCGGAGAAAATAAGAGCATCTATGACTGACAAAGGACTGCAAAAGACTCCAGGGTCGAGTTCACTGATGCTAAATGGAGGAGAATCCTACCACTTCCAGTAA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_309319.p1 GENE.S_Transcript_309319~~S_Transcript_309319.p1 ORF type:5prime_partial len:239 (+),score=44.55,PPR|PF01535.16|0.028,PPR|PF01535.16|9.5e-07,PPR|PF01535.16|0.00027,PPR|PF01535.16|0.014,PPR|PF01535.16|0.4,PPR_2|PF13041.2|1.3,PPR_2|PF13041.2|3.4e-09,PPR_2|PF13041.2|0.02,PPR_2|PF13041.2|0.51,PPR_2|PF13041.2|0.54,PPR_1|PF12854.3|0.15,PPR_1|PF12854.3|0.0021,PPR_1|PF12854.3|4,PPR_1|PF12854.3|0.0013,PPR_3|PF13812.2|61,PPR_3|PF13812.2|13,PPR_3|PF13812.2|0.03,PPR_3|PF13812.2|0.14,PPR_3|PF13812.2|0.8 S_Transcript_309319:1-717(+)
LDVGKEVHEMIFEKGIKLNQFVINGLVDMYAKCGDLGTARSIFEGMSQRNATCWNSMICGFAVHGKCQDAVNFFHEMEVTGVIPDEISFLSVLSACAHGGLVQEGLNIFSKMKKYGVEAGVKHYGCIVDLLGRAGRLKEAFALVKSMPMKPNDTIWGCLLGACRLHSEATLGEDALEDISHRDYGKGSHYVLLSNIYASSDRWEKAEKIRASMTDKGLQKTPGSSSLMLNGGESYHFQ*

Click here to download the sequence:
Link to NCBI Protein BLAST