Transcript Information: S_Transcript_309685.p1


Annotated TAIR IDAT4G21705.1
Annotated Gene NameTetratricopeptide repeat (TPR)-like superfamily protein
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr4:11533257-11534817 | Reverse length=492
E-Value3E-112
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 14.3677826454685
Replicate 22.9473192156985
Replicate 33.2732336942268
Condition 2: 8 Hour
Replicate 15.2499529597522
Replicate 25.5929621599317
Replicate 35.4916782951765
Condition 3: 24 Hour
Replicate 12.5430112460424
Replicate 21.9030681476322
Replicate 32.1178815912693


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_309685.p1 GENE.S_Transcript_309685~~S_Transcript_309685.p1 ORF type:complete len:524 (+),score=99.90,PPR_2|PF13041.2|76,PPR_2|PF13041.2|0.00012,PPR_2|PF13041.2|8.5e-09,PPR_2|PF13041.2|1.8e+02,PPR_2|PF13041.2|0.063,PPR_2|PF13041.2|1.8,PPR_2|PF13041.2|0.024,PPR_2|PF13041.2|4.4e+02,PPR_2|PF13041.2|1.6e+03,PPR_2|PF13041.2|2.5e+02,PPR|PF01535.16|0.00015,PPR|PF01535.16|0.0048,PPR|PF01535.16|5.1e+02,PPR|PF01535.16|3.2e+02,PPR|PF01535.16|0.58,PPR|PF01535.16|0.012,PPR|PF01535.16|0.027,PPR|PF01535.16|3.1,PPR|PF01535.16|3.5e+02,PPR|PF01535.16|4.9e+02,PPR_3|PF13812.2|3.2e+02,PPR_3|PF13812.2|15,PPR_3|PF13812.2|0.0049,PPR_3|PF13812.2|8.1,PPR_3|PF13812.2|1.3e+02,PPR_3|PF13812.2|0.57,PPR_3|PF13812.2|2.1e+02,PPR_3|PF13812.2|6.8e+02,PPR_3|PF13812.2|1.6e+04,PPR_3|PF13812.2|1.4e+02,TPR_12|PF13424.2|5.4e+03,TPR_12|PF13424.2|1.2e+04,TPR_12|PF13424.2|35,TPR_12|PF13424.2|0.22,TPR_12|PF13424.2|3.1e+02,TPR_12|PF13424.2|4.1e+03,TPR_12|PF13424.2|1.2,TPR_14|PF13428.2|2.5e+03,TPR_14|PF13428.2|8e+03,TPR_14|PF13428.2|2.1e+03,TPR_14|PF13428.2|4.8e+02,TPR_14|PF13428.2|77,TPR_14|PF13428.2|27,TPR_14|PF13428.2|0.53,PPR_1|PF12854.3|2.6,PPR_1|PF12854.3|5.1e+02,PPR_1|PF12854.3|1e+02,PPR_1|PF12854.3|36,PPR_1|PF12854.3|1.1e+02,PPR_1|PF12854.3|68,PPR_1|PF12854.3|2.9e+02,TPR_2|PF07719.13|1e+04,TPR_2|PF07719.13|1.1e+04,TPR_2|PF07719.13|2e+03,TPR_2|PF07719.13|58,TPR_2|PF07719.13|1.4e+03,TPR_2|PF07719.13|1.6e+03,TPR_2|PF07719.13|0.0024,TPR_11|PF13414.2|6e+02,TPR_11|PF13414.2|1.7e+03,TPR_11|PF13414.2|4.1,TPR_11|PF13414.2|9.4e+03,TPR_11|PF13414.2|0.014,TPR_1|PF00515.24|3.1e+03,TPR_1|PF00515.24|2e+03,TPR_1|PF00515.24|70,TPR_1|PF00515.24|7.5e+03,TPR_1|PF00515.24|4.8e+03,TPR_1|PF00515.24|2.2e+03,TPR_1|PF00515.24|0.0015 S_Transcript_309685:154-1725(+)
ATGGGGTTTCCCAGAATCTCAATCCTAAAACTCCTACTCTCAAAAACAGCCCTCCAATCCCATAAACCCTTCACAAATCCACAACTCAAATTCACCTTCTTCATTCCTTCCTTAACCACAAGAACATACCATTACCACCCATCAAATGAAACCTTCAAAGATCATTTGAACCAAAGGGTTATTCTTTCTGCAGCTCGTTCACCCAATGAGAGTGTCATTCCTGTCCTTGATTTGTGGGTTCAACAGGGCAATCCACTCAAAGAAACTGACCTTCAACGTCTTGTTCGTACTCTCCGCTCCAAGAAACGTTTCGCCCGTGCCCTCGAGGTCTCTGAGTGGATGATGAGGAAGAAACTGGGCCCTTCGACTTCTGCGAGTAGTCATGCTGTGCAGCTGGATCTCATTGGCAAGGTGCACGGAACTGATGCTGCTGAAAAATATTTCAACGAAGTGGATGTTCCTTCTGAACAGGTTTATGGTGCACTTCTCAATTGCTATGTGAGAGAAGGCCTTGTAGATAAATCGCTCTCTCATTTTAGGAAGATGAAAGTTGTGGGATTAGCTCATAATCCTCTTACTTACAATGGCATTATGACCCTCTATATGAACACCGGTCAAGTTGAGAAAATACCCGAGGTGCTATTAGAGATGGAGAAGGATGGTGTATCCCCAGACAATGTCAGCTATAGAATCTGCCTTAAAGCCTATGAATCAAGATCTGATTTCGCGAGCATGGAGAACCTGCTAAACAAAATAGAAAAGGAACGCCACATCTCCATTGACTGGAGAACATATACAGCAGTGGCTAATTACTTCATAAAAGGTGGTCTTCGTGAAAAAGCAATTCATTACTTGCAGAAAGCAGAAGCTAAAGTAAATAGAGAGGCAGCTGGATATAACCATTTGATTAGTGTTTATGCAAACATTGGAGATGTATCTCAGGTGATGAGGTTGTGGGAGCAGCAGAAAATCACCTGTCAGAGGCAAATTAATGTTGATTTTATGACCATGATGGGCTCTCTGGTTAAGCTTGGTGAGCTCCGAGAGGCCGAAAGAATATTCGAAGATTGGGAATCTTCTAATATGTTTTATGATTTCCGGGTACCTAATGTTCTTTTAATCGGCTATATACAGCAGGGAATGGTCGAGAAAGCTGAAAGGATGCTCGAGGGGATAATCAGTCGAGGAAGGACCCCAGTTCCAAACAGCTGGAGCATCATTGCTACTGGGCACATCAAGAATCAGAAGATGGATAAAGCTGTAGAATGCCTGGAGCGAGCCCTTCAACTTGTGCCCGAAAACCAGGGCTGGCTGCCTAAACCCGAGCTTATTTCAAGCATACTCAACTGGCTGGCCGAGAACTCAGATGTTGAAGAAGTCGAAGCATTTCTCAAGTTGTTGTCTGTTGCTGTTCCGATGGATCGAGAGATGTACCATACCTTGCTAAAAGCAAATGTTAGACATGGAAGGAAAATTGATGGCATCTTACAGAAGATGAAAGATGATAAAATAGAGGTAGATGACGAAACTGAGAAGATTCTGAGCTCAGCTGCTCAATCAGACCTAGGCTGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_309685.p1 GENE.S_Transcript_309685~~S_Transcript_309685.p1 ORF type:complete len:524 (+),score=99.90,PPR_2|PF13041.2|76,PPR_2|PF13041.2|0.00012,PPR_2|PF13041.2|8.5e-09,PPR_2|PF13041.2|1.8e+02,PPR_2|PF13041.2|0.063,PPR_2|PF13041.2|1.8,PPR_2|PF13041.2|0.024,PPR_2|PF13041.2|4.4e+02,PPR_2|PF13041.2|1.6e+03,PPR_2|PF13041.2|2.5e+02,PPR|PF01535.16|0.00015,PPR|PF01535.16|0.0048,PPR|PF01535.16|5.1e+02,PPR|PF01535.16|3.2e+02,PPR|PF01535.16|0.58,PPR|PF01535.16|0.012,PPR|PF01535.16|0.027,PPR|PF01535.16|3.1,PPR|PF01535.16|3.5e+02,PPR|PF01535.16|4.9e+02,PPR_3|PF13812.2|3.2e+02,PPR_3|PF13812.2|15,PPR_3|PF13812.2|0.0049,PPR_3|PF13812.2|8.1,PPR_3|PF13812.2|1.3e+02,PPR_3|PF13812.2|0.57,PPR_3|PF13812.2|2.1e+02,PPR_3|PF13812.2|6.8e+02,PPR_3|PF13812.2|1.6e+04,PPR_3|PF13812.2|1.4e+02,TPR_12|PF13424.2|5.4e+03,TPR_12|PF13424.2|1.2e+04,TPR_12|PF13424.2|35,TPR_12|PF13424.2|0.22,TPR_12|PF13424.2|3.1e+02,TPR_12|PF13424.2|4.1e+03,TPR_12|PF13424.2|1.2,TPR_14|PF13428.2|2.5e+03,TPR_14|PF13428.2|8e+03,TPR_14|PF13428.2|2.1e+03,TPR_14|PF13428.2|4.8e+02,TPR_14|PF13428.2|77,TPR_14|PF13428.2|27,TPR_14|PF13428.2|0.53,PPR_1|PF12854.3|2.6,PPR_1|PF12854.3|5.1e+02,PPR_1|PF12854.3|1e+02,PPR_1|PF12854.3|36,PPR_1|PF12854.3|1.1e+02,PPR_1|PF12854.3|68,PPR_1|PF12854.3|2.9e+02,TPR_2|PF07719.13|1e+04,TPR_2|PF07719.13|1.1e+04,TPR_2|PF07719.13|2e+03,TPR_2|PF07719.13|58,TPR_2|PF07719.13|1.4e+03,TPR_2|PF07719.13|1.6e+03,TPR_2|PF07719.13|0.0024,TPR_11|PF13414.2|6e+02,TPR_11|PF13414.2|1.7e+03,TPR_11|PF13414.2|4.1,TPR_11|PF13414.2|9.4e+03,TPR_11|PF13414.2|0.014,TPR_1|PF00515.24|3.1e+03,TPR_1|PF00515.24|2e+03,TPR_1|PF00515.24|70,TPR_1|PF00515.24|7.5e+03,TPR_1|PF00515.24|4.8e+03,TPR_1|PF00515.24|2.2e+03,TPR_1|PF00515.24|0.0015 S_Transcript_309685:154-1725(+)
MGFPRISILKLLLSKTALQSHKPFTNPQLKFTFFIPSLTTRTYHYHPSNETFKDHLNQRVILSAARSPNESVIPVLDLWVQQGNPLKETDLQRLVRTLRSKKRFARALEVSEWMMRKKLGPSTSASSHAVQLDLIGKVHGTDAAEKYFNEVDVPSEQVYGALLNCYVREGLVDKSLSHFRKMKVVGLAHNPLTYNGIMTLYMNTGQVEKIPEVLLEMEKDGVSPDNVSYRICLKAYESRSDFASMENLLNKIEKERHISIDWRTYTAVANYFIKGGLREKAIHYLQKAEAKVNREAAGYNHLISVYANIGDVSQVMRLWEQQKITCQRQINVDFMTMMGSLVKLGELREAERIFEDWESSNMFYDFRVPNVLLIGYIQQGMVEKAERMLEGIISRGRTPVPNSWSIIATGHIKNQKMDKAVECLERALQLVPENQGWLPKPELISSILNWLAENSDVEEVEAFLKLLSVAVPMDREMYHTLLKANVRHGRKIDGILQKMKDDKIEVDDETEKILSSAAQSDLG*

Click here to download the sequence:
Link to NCBI Protein BLAST