Transcript Information: S_Transcript_30977.p1


Annotated TAIR IDAT3G59280.1
Annotated Gene NameProtein Transporter, Pam16
Annotated Gene Symbol(s)TXR1
Annotation TypeOrtholog
Chromosome Positionchr3:21909266-21910519 | Reverse length=116
E-Value4.5E-53
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 16.7588574565538
Replicate 26.6538571681394
Replicate 37.9040297501145
Condition 2: 8 Hour
Replicate 110.944777041068
Replicate 210.653261257013
Replicate 39.3609277841982
Condition 3: 24 Hour
Replicate 18.090697589109
Replicate 26.2355460421697
Replicate 37.2062984014617


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_30977.p1 GENE.S_Transcript_30977~~S_Transcript_30977.p1 ORF type:complete len:189 (+),score=38.32,Pam16|PF03656.9|7.4e-22 S_Transcript_30977:152-718(+)
ATGCTTCGAAGAGAGACGTCAAAACAAATAAGGGTTCGCTTCTCCCATTCGTCGCCTTCCCTTGTACTTCTTTCTAATTCTCCCATTGATCCAAAGACAAGATCATTGTGGGACTTTATTAGTTTCCCTTCAATGGCTTCAAAAATAATTGCTCAATTACTTGTCGTTGGTTCTGGGGTTTTAGTTAGAGCTTTTACTCAAGCTTATCGTCAAGCTCTTGCAAATGCTTCTAAAACTGGAGCTGCTCAAGAAGCAATGCAGAATACAGTCCGGCGGGCGAGTAGAGCCATCACAGAGCAAGAGGCAAGGCAGATTCTTGGTGTCACTGAGAATAGTGCGTGGGAAGAGATTTTGAAGAAATATGATGTTTTGTTTGAGAGTAATGCCAAGCAAGGGAGCTTCTACCTCCAGTCAAAGGTCCATCGAGCCAAGGAGTGTTTAGAGCCTTTATATCAGAACAAAGGTCAGAGTTCTGCTAATGGTAATTGTGGAATTCTGATTGGAGTGCTGCTACTACTGCTAGTAATTTTTGATCTTGTGTATAGAGAACCCTCATGGTTAGAGTAG

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_30977.p1 GENE.S_Transcript_30977~~S_Transcript_30977.p1 ORF type:complete len:189 (+),score=38.32,Pam16|PF03656.9|7.4e-22 S_Transcript_30977:152-718(+)
MLRRETSKQIRVRFSHSSPSLVLLSNSPIDPKTRSLWDFISFPSMASKIIAQLLVVGSGVLVRAFTQAYRQALANASKTGAAQEAMQNTVRRASRAITEQEARQILGVTENSAWEEILKKYDVLFESNAKQGSFYLQSKVHRAKECLEPLYQNKGQSSANGNCGILIGVLLLLLVIFDLVYREPSWLE*

Click here to download the sequence:
Link to NCBI Protein BLAST