Transcript Information: S_Transcript_309868.p1


Annotated TAIR IDAT5G13930.1
Annotated Gene NameChalcone and stilbene synthase family protein
Annotated Gene Symbol(s)CHS, TT4, ATCHS
Annotation TypeOrtholog
Chromosome Positionchr5:4488762-4490035 | Forward length=395
E-Value8.5E-137
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 12.9696911249558
Replicate 20.56814050362699
Replicate 30.39576686874679
Condition 2: 8 Hour
Replicate 10.36610112132417
Replicate 20.76813214213654
Replicate 30.73187459587919
Condition 3: 24 Hour
Replicate 10.75003891813199
Replicate 21.2645045085516
Replicate 30.75774382332967


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_309868.p1 GENE.S_Transcript_309868~~S_Transcript_309868.p1 ORF type:5prime_partial len:233 (+),score=13.83,Chal_sti_synt_C|PF02797.11|2.2e-69,Chal_sti_synt_N|PF00195.15|3.1e-35,ACP_syn_III_C|PF08541.6|4.7e-07,ACP_syn_III|PF08545.6|1.3e-06 S_Transcript_309868:2-700(+)
CAACAAGGCTGCTACGCTGGCGGCACTGTCCTCCGCCTCGCCAAGGACATCGCCGAAAACAACCGTGGGGCCCGGGTTCTTGTCGTCTGTTCCGAGATCTCCGTCATCTGCTTCCGCGGGCCCACCGAGACCCACCTCGACTCCATGGTGGGCCAGGCATTGTTTGGTGACGGAGCCGGGGCGGTGATCGTTGGGGCCGACCCGGATGAGTTCGTGGAGAGGCCCATCTTCCAGCTGGTCTCGGCGGCCCAGACCATCTTGCCGGACTCCGAAGGCGCCATCGACGGACACTTGCGTCAAGTGGGGCTGGCCTTCCATCTCCTCAAAGACGTTCCCAGGCTCATCTCCACTAACATCGGTAAGGCCCTAAATGATGCGTTTAGTCCCATCGGTATCGAAGACTGGAACTCCATCTTCTGGGTGGCCCACCCAGGTGGGCCCTCAATCCTGGACCAGGTGGAGTCCAAACTCGGGCTTAAGGAAGACAAACTCAGTGCGAGTCGGCACGTGCTGAGCGAGTTCGGCAACATGTCAAGTGCTTGTGTGCTCTTCATTTTGGATGAGATGAGGAAGAGATCAGTCAAAGAAGGGAAGGCCACCACTGGAGATGGCTTTGACTGGGGAGTCTTGTTTGGATTCGGGCCGGGTCTCACTGTTGAGACCGTTGTGCTTCATAGTGTTCCTACAGTCAACAGTTAA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_309868.p1 GENE.S_Transcript_309868~~S_Transcript_309868.p1 ORF type:5prime_partial len:233 (+),score=13.83,Chal_sti_synt_C|PF02797.11|2.2e-69,Chal_sti_synt_N|PF00195.15|3.1e-35,ACP_syn_III_C|PF08541.6|4.7e-07,ACP_syn_III|PF08545.6|1.3e-06 S_Transcript_309868:2-700(+)
QQGCYAGGTVLRLAKDIAENNRGARVLVVCSEISVICFRGPTETHLDSMVGQALFGDGAGAVIVGADPDEFVERPIFQLVSAAQTILPDSEGAIDGHLRQVGLAFHLLKDVPRLISTNIGKALNDAFSPIGIEDWNSIFWVAHPGGPSILDQVESKLGLKEDKLSASRHVLSEFGNMSSACVLFILDEMRKRSVKEGKATTGDGFDWGVLFGFGPGLTVETVVLHSVPTVNS*

Click here to download the sequence:
Link to NCBI Protein BLAST