Transcript Information: S_Transcript_309872.p1


Annotated TAIR IDAT5G13930.1
Annotated Gene NameChalcone and stilbene synthase family protein
Annotated Gene Symbol(s)CHS, TT4, ATCHS
Annotation TypeOrtholog
Chromosome Positionchr5:4488762-4490035 | Forward length=395
E-Value2.1E-70
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10
Replicate 20
Replicate 30
Condition 2: 8 Hour
Replicate 10.24941976979103
Replicate 20.13082952420893
Replicate 30
Condition 3: 24 Hour
Replicate 10
Replicate 20
Replicate 30


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_309872.p1 GENE.S_Transcript_309872~~S_Transcript_309872.p1 ORF type:complete len:171 (+),score=20.05,Chal_sti_synt_N|PF00195.15|7e-65,ACP_syn_III|PF08545.6|1.5e-06 S_Transcript_309872:286-798(+)
ATGTGGGACAAGAATGAACCATCCCTAGACAGACGGCAAGACATACTCATAAGAGAGGTTCCCAAACTTGGCATGGTGGCTGCCATTAAGGCCATGGAGGAGTGGGGCCAGCCTCGCTCCAAGATCACCCATGTCATCTTCTACACAAGCTCCGGTGTTGACATGGCGGGGGCCGACTATCAACTCATCAAGCTCCTCGGTCTCAGCCCCTGCGTTGGCAGGTTTATGCTCTACCAGCAAGGCTGCCATTCCGGTGGCACTGTCCTTCGCCTCGCCAAGGACATAGCCGAGAACAACCGTGGAGCTCGTATCCTTGTTGTCTGCTCTAAAATGATCACCGTCTTCGGCTTTCATGGGCCCACCGAGACTTACCTTGACTCCATGTTGGTGGGTCAAGCTCTGTTCGGAGATGGTGCAGGGGCTGTAATTGTAGGTGCTGACCCAGATGAGCCCACTGAGCGGGCCCATCTTCGAGCTCGTTTGGACGGCGCAGACAATCTTGCCAGACTCTGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_309872.p1 GENE.S_Transcript_309872~~S_Transcript_309872.p1 ORF type:complete len:171 (+),score=20.05,Chal_sti_synt_N|PF00195.15|7e-65,ACP_syn_III|PF08545.6|1.5e-06 S_Transcript_309872:286-798(+)
MWDKNEPSLDRRQDILIREVPKLGMVAAIKAMEEWGQPRSKITHVIFYTSSGVDMAGADYQLIKLLGLSPCVGRFMLYQQGCHSGGTVLRLAKDIAENNRGARILVVCSKMITVFGFHGPTETYLDSMLVGQALFGDGAGAVIVGADPDEPTERAHLRARLDGADNLARL*

Click here to download the sequence:
Link to NCBI Protein BLAST