Transcript Information: S_Transcript_309873.p1


Annotated TAIR IDAT5G13930.1
Annotated Gene NameChalcone and stilbene synthase family protein
Annotated Gene Symbol(s)CHS, TT4, ATCHS
Annotation TypeOrtholog
Chromosome Positionchr5:4488762-4490035 | Forward length=395
E-Value2.2E-88
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10.72580912459583
Replicate 20.60171244247768
Replicate 30.4191530928091
Condition 2: 8 Hour
Replicate 10
Replicate 20.305070663269
Replicate 30.19378043277256
Condition 3: 24 Hour
Replicate 10.29788477487174
Replicate 20.41206930138813
Replicate 31.031810907482


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_309873.p1 GENE.S_Transcript_309873~~S_Transcript_309873.p1 ORF type:complete len:220 (+),score=29.19,Chal_sti_synt_N|PF00195.15|1.6e-64,ACP_syn_III|PF08545.6|2e-06,Chal_sti_synt_C|PF02797.11|7.7e-06 S_Transcript_309873:286-945(+)
ATGTGGGACAAGAATGAACCATCCCTAGACAGACGGCAAGACATACTCATAAGAGAGGTTCCCAAACTTGGCATGGTGGCTGCCATTAAGGCCATGGAGGAGTGGGGCCAGCCTCGCTCCAAGATCACCCATGTCATCTTCTACACAAGCTCCGGTGTTGACATGGCGGGGGCCGACTATCAACTCATCAAGCTCCTCGGTCTCAGCCCCTGCGTTGGCAGGTTTATGCTCTACCAGCAAGGCTGCCATTCCGGTGGCACTGTCCTTCGCCTCGCCAAGGACATAGCCGAGAACAACCGTGGAGCTCGTATCCTTGTTGTCTGCTCTAAAATGATCACCGTCTTCGGCTTTCATGGGCCCACCGAGACTTACCTTGACTCCATGTTGGTGGGTCAAGCTCTGTTCGGAGATGGTGCAGGGGCTGTAATTGTAGGTGCTGACCCAGATGAGCCCACTGAGCGGCCCATCTTCGAGCTCGTTTGGACGGCGCAGACAATCTTGCCGGATTCTGAAGGAGCCATTGAAGGGCATTTGCGTGAAGCAGGGCTTTTCTTCAACATCAATGAAAATTTCCCTACCCTCATGCTTTTGCTCCACTCGCCATTGACGACTGGAACTCCATCTTTTGGGTTGCCCATCCGGGAAGCCCTGCCATCCTAG

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_309873.p1 GENE.S_Transcript_309873~~S_Transcript_309873.p1 ORF type:complete len:220 (+),score=29.19,Chal_sti_synt_N|PF00195.15|1.6e-64,ACP_syn_III|PF08545.6|2e-06,Chal_sti_synt_C|PF02797.11|7.7e-06 S_Transcript_309873:286-945(+)
MWDKNEPSLDRRQDILIREVPKLGMVAAIKAMEEWGQPRSKITHVIFYTSSGVDMAGADYQLIKLLGLSPCVGRFMLYQQGCHSGGTVLRLAKDIAENNRGARILVVCSKMITVFGFHGPTETYLDSMLVGQALFGDGAGAVIVGADPDEPTERPIFELVWTAQTILPDSEGAIEGHLREAGLFFNINENFPTLMLLLHSPLTTGTPSFGLPIREALPS*

Click here to download the sequence:
Link to NCBI Protein BLAST