Transcript Information: S_Transcript_309878.p1


Annotated TAIR IDAT4G25500.1
Annotated Gene Namearginine/serine-rich splicing factor 35
Annotated Gene Symbol(s)ATRSP35, ATRSP40, AT-SRP40, RSP35, RS40, At-RS40
Annotation TypeOrtholog
Chromosome Positionchr4:13025168-13027243 | Forward length=350
E-Value5E-129
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 141.9703245286
Replicate 250.847217510688
Replicate 348.982320566122
Condition 2: 8 Hour
Replicate 167.033574581095
Replicate 271.205023627517
Replicate 369.677609375423
Condition 3: 24 Hour
Replicate 143.846361128074
Replicate 246.302410747376
Replicate 346.737623503387


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_309878.p1 GENE.S_Transcript_309878~~S_Transcript_309878.p1 ORF type:internal len:279 (-),score=53.20,RRM_1|PF00076.18|3.8e-13,RRM_1|PF00076.18|1.5e-15,RRM_6|PF14259.2|7e-10,RRM_6|PF14259.2|4.3e-11,RRM_5|PF13893.2|6.8e-05,RRM_5|PF13893.2|2.9e-07,RNA_bind|PF08675.7|0.28,RNA_bind|PF08675.7|3.6e-05,Nup35_RRM_2|PF14605.2|1.5e+02,Nup35_RRM_2|PF14605.2|2.9e-06 S_Transcript_309878:3-836(-)
TCCACACAGAGCGGCGATTCTTCACTCTCGAGGAAAATGAGGCCAATCTTCTGTGGCAACTTTGAGTTTGATGCACGTTCAGGTGATCTGGAACGCCTTTTTAGACGATATGGCAAAGTTGATAGAGTGGATATGAAGTCTGGATTCGCATTCGTTTATATGGAGGATGAAAGGGATGCTGAATATGCAATTCGAGCACTTGATCGAACTGAATTTGGCAGAAAAGGACGGAGACTCCGTGTTGAATGGACAAAGCATGAGCGAGGTGGCAGGAAGTCGGTCAATTCTAGAAGATCTGCTAATCTGAAGCCTTCTAAGACCTTATTTGTTATCAATTTCCCATATCATACGAAGACAAAGGACTTGGAAAGGCATTTTGATCCATATGGGAAAATTGTGAATGTGAGAATCAGAAGAAATTTTGCTTTTGTGCAGTATGAATCCCAGGAGGATGCAACTAAGGCACTCGATGCAGCAAACATGAGCAAGATGTTGGATCGAGTAATATCTGTGGAATATGCTGCTCGAGAGGATGATGATCGAAGAGATGTCTATAGCCCGGATAGGAGAGTGCGTAATAGGTCACCTGACAGGAGACGGCGGTCACCAAGTCCGTATAGGAGAGAGAGAGGAAGTCCTGACTATGGAACTGGCTCTAGCCCTGCTGCTTATAGGAGAGAAAGAGGCAGCCCTGAGTATGGTCATGGTCGTGGCTCAAGCCGTAGCCCTCGTAGAGCAGATAGGGGCAGCCCCGAGTATGGTCATGGTCGTGGCTCAAGCCGTAGCCCTCGTAGAGCAGATAGGGGCAGCCCCGAGTATGGTCATGGTCGTGGC

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_309878.p1 GENE.S_Transcript_309878~~S_Transcript_309878.p1 ORF type:internal len:279 (-),score=53.20,RRM_1|PF00076.18|3.8e-13,RRM_1|PF00076.18|1.5e-15,RRM_6|PF14259.2|7e-10,RRM_6|PF14259.2|4.3e-11,RRM_5|PF13893.2|6.8e-05,RRM_5|PF13893.2|2.9e-07,RNA_bind|PF08675.7|0.28,RNA_bind|PF08675.7|3.6e-05,Nup35_RRM_2|PF14605.2|1.5e+02,Nup35_RRM_2|PF14605.2|2.9e-06 S_Transcript_309878:3-836(-)
STQSGDSSLSRKMRPIFCGNFEFDARSGDLERLFRRYGKVDRVDMKSGFAFVYMEDERDAEYAIRALDRTEFGRKGRRLRVEWTKHERGGRKSVNSRRSANLKPSKTLFVINFPYHTKTKDLERHFDPYGKIVNVRIRRNFAFVQYESQEDATKALDAANMSKMLDRVISVEYAAREDDDRRDVYSPDRRVRNRSPDRRRRSPSPYRRERGSPDYGTGSSPAAYRRERGSPEYGHGRGSSRSPRRADRGSPEYGHGRGSSRSPRRADRGSPEYGHGRG

Click here to download the sequence:
Link to NCBI Protein BLAST