Transcript Information: S_Transcript_309973.p1


Annotated TAIR IDAT1G71770.1
Annotated Gene Namepoly(A)-binding protein 5
Annotated Gene Symbol(s)PAB5
Annotation TypeOrtholog
Chromosome Positionchr1:26990777-26993489 | Reverse length=682
E-Value2E-78
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10.21636586370065
Replicate 20.089686136412662
Replicate 30
Condition 2: 8 Hour
Replicate 10.086688578524931
Replicate 20.18188494829046
Replicate 30.086649787012119
Condition 3: 24 Hour
Replicate 10
Replicate 20.18425863070201
Replicate 30.10252863579316


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_309973.p1 GENE.S_Transcript_309973~~S_Transcript_309973.p1 ORF type:complete len:246 (+),score=58.61,RRM_1|PF00076.18|4.4e-18,RRM_1|PF00076.18|1.1e-17,RRM_6|PF14259.2|3.5e-06,RRM_6|PF14259.2|2.7e-10,RRM_5|PF13893.2|7.5e-05,RRM_5|PF13893.2|2.3e-05 S_Transcript_309973:57-740(+)
ATGGCGGAGACTACTACTACCCCTCTTCAAGAACCCCCATTGACGAAACAAACACCAGGAATCGGAATTCAAACCCAAACCCAGAAAGCAGAGAGTGGTGGTGGTGGGAATAATAATAATAATGATGATACCAATATGGCATTGTATGTAGGTGATCTTGATGGGAATGTAGATGAAGGACAATTGTATGATTTGTTTAGCCAAATTGCTCCTGTTATTTCTGTTAGGGTTTGTAGGGATCTCACTAAGAGGTTTTCTCTTGGTTATGGATATGTCAATTTTACTTCTCATCAAGATGCTGCAAGTGCAATGGAGCAATTGAATTTTACACCTGTCAATGGAAAACCTATCAGGATCATGTTTTGTCGCCGTGATCCTAGCCTTCGGAAGAGTGGATATGCAAATGTGTTCATCATGAACTTGGATTCTTCTATAGACAACAAGGCATTGGATGACACCTTTGCTGCTTTTGGCACTGTACTTCCCTGCAAGGTAACTATCGATAGCAATGGGCAATCTCAAGGGTATGGATTTGTACAGTTTGACTGTGAGGAAGCAGCGCAAAAGGCTATCGAAAGCTTGAATGGCATGTTGTTGAATGATAAACAAGTTTTTGTAGGGTCTTTTGTTCGGCGTCAAGAAAGAAGTAATAATAGTGGATCACCAGAGTTTACTAACGTTTAA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_309973.p1 GENE.S_Transcript_309973~~S_Transcript_309973.p1 ORF type:complete len:246 (+),score=58.61,RRM_1|PF00076.18|4.4e-18,RRM_1|PF00076.18|1.1e-17,RRM_6|PF14259.2|3.5e-06,RRM_6|PF14259.2|2.7e-10,RRM_5|PF13893.2|7.5e-05,RRM_5|PF13893.2|2.3e-05 S_Transcript_309973:57-740(+)
MAETTTTPLQEPPLTKQTPGIGIQTQTQKAESGGGGNNNNNDDTNMALYVGDLDGNVDEGQLYDLFSQIAPVISVRVCRDLTKRFSLGYGYVNFTSHQDAASAMEQLNFTPVNGKPIRIMFCRRDPSLRKSGYANVFIMNLDSSIDNKALDDTFAAFGTVLPCKVTIDSNGQSQGYGFVQFDCEEAAQKAIESLNGMLLNDKQVFVGSFVRRQERSNNSGSPEFTNV*

Click here to download the sequence:
Link to NCBI Protein BLAST