Transcript Information: S_Transcript_310105.p1


Annotated TAIR IDAT5G07580.1
Annotated Gene NameIntegrase-type DNA-binding superfamily protein
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr5:2399525-2400349 | Forward length=274
E-Value2.3E-33
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 111.958264872196
Replicate 217.786301713767
Replicate 313.324267478901
Condition 2: 8 Hour
Replicate 17.6095005096378
Replicate 29.1655591343373
Replicate 37.9817050503234
Condition 3: 24 Hour
Replicate 15.8702109820539
Replicate 26.7891594149411
Replicate 33.4444201610511


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_310105.p1 GENE.S_Transcript_310105~~S_Transcript_310105.p1 ORF type:5prime_partial len:227 (-),score=29.96,AP2|PF00847.16|6.7e-14,AP2|PF00847.16|2.2e+03 S_Transcript_310105:216-896(-)
TCCAAGTCAAAGTTCAACGAGAGGAAGCCGTCGATGAAGATCTCTGTGCCGTCTCCTGTGAAGAAGTTCGAGGTGATCGAGTTCGTGCCCGAGCCGACTCAGCAGAACTCGGCTGCGCTTCAGCCGCCGAGTCAAGAGGACGAGTCATCTCGGAGGCACTACAGAGGAGTCAGGAGAAGGCCGTGGGGTAAGTACGCTGCCGAGATTCGGGACCCAAACAAGAGAGGGTCCCGAGTCTGGCTCGGTACTTACGACACAGCTGTCGAGGCGGCCCGAGCCTACGACCGAGCCGCCTTCAAGCTCCGTGGCTGTAAGGCCATTCTTAACTTTCCTCTCGAGGTAGGGAAAATCGTGGAATCTACCACCGCTACAAACGGCAGCGCTGCCACGACTGGTGGTGGAAAGAAGAGGAAGGAGGAGAAGAAAGAGGTCGAGGAGGAAGTCAGAGAAAAGAAGGTGAAAGTGAAGGAGGAAACTATTAGTGAAGCTACCACTACGACGTCGTTTGCAGTAGGTAATAATACGAATAATAATGAGGTGGGGCCGTTGACGCCGTCAAATTGGATGGCGGTATGGGATTTGGATGGGAAAGATATGAAAGAAGAGATCTTTAACATCCCACCCTTGTCGCCGTTATCTCCACACCCACCTTTTGGATATTCACAGCTAGCTGTTATGTAG

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_310105.p1 GENE.S_Transcript_310105~~S_Transcript_310105.p1 ORF type:5prime_partial len:227 (-),score=29.96,AP2|PF00847.16|6.7e-14,AP2|PF00847.16|2.2e+03 S_Transcript_310105:216-896(-)
SKSKFNERKPSMKISVPSPVKKFEVIEFVPEPTQQNSAALQPPSQEDESSRRHYRGVRRRPWGKYAAEIRDPNKRGSRVWLGTYDTAVEAARAYDRAAFKLRGCKAILNFPLEVGKIVESTTATNGSAATTGGGKKRKEEKKEVEEEVREKKVKVKEETISEATTTTSFAVGNNTNNNEVGPLTPSNWMAVWDLDGKDMKEEIFNIPPLSPLSPHPPFGYSQLAVM*

Click here to download the sequence:
Link to NCBI Protein BLAST