Transcript Information: S_Transcript_31015.p1


Annotated TAIR IDAT5G17070.1
Annotated Gene NameCONTAINS InterPro DOMAIN/s: Protein phosphatase 4 core regulatory subunit R2 (InterPro:IPR015267); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink).
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr5:5613514-5616088 | Reverse length=277
E-Value7.6E-58
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 12.8677803055151
Replicate 21.9019646170271
Replicate 32.9412984271259
Condition 2: 8 Hour
Replicate 15.0555882217341
Replicate 26.8465571268129
Replicate 35.6045978616546
Condition 3: 24 Hour
Replicate 14.7079490281453
Replicate 24.2006202490644
Replicate 34.2399126370669


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_31015.p1 GENE.S_Transcript_31015~~S_Transcript_31015.p1 ORF type:5prime_partial len:232 (+),score=67.10,PPP4R2|PF09184.7|2.5e-14 S_Transcript_31015:2-697(+)
AATAATGACTTGCCCCAGATGCCTGCTACTAATGGAGGTGCGGAATCTGAGCATGAGCTATCTGCTGAAGAAGTGAAGGGTGCACTTGAAATCATAGCATCTACAGGAAAATTTTGGCATGATTGGGATGAGCTAAAGGGCATGCTAGTTTTTCAGCTGAAGCAGGTTCTTTCAGAATACCCAGAAGCAACAAAAGGTGATGATCAACAAAATTCCTCTTTGGGGGAGAGCTATCCGGAGTTGGCGCAAAGGTTGGAGGCAGCTCTATTTAGCTTTATAGAAGGCCCCCCTTTCACATTGCAAAGACTTTGTGAGATTTTGCTTAATGCACGGACTATTTATCCAAATCTTTCAAAGCTTGCTCTTGCATTGGAAAAGAACTTGTTGGTGACAAGTACCATTACAAAGTCTACGGATCCATATCCTTCCTCAATGATGCCTGTACCTAATGCCCCGGAAGAACACATTGAGGATGCCCAGCGTCAACCTGAGCCTGAGCCTGAGCCTCAGCAACCTCAACCTCAGCCTCATTCCAATTCAGTGGAAAATGGAGGGGAACTGGCAACAGGTGATAGAGATGAGGTAATGTCAGAAGTAGATACCCATGTTGATGACAGTATGACTATTGATATGGAAACCTTTGAAGAGATTATCAGTTCATCGGAAGGAAATCCAGAATCTGTTATTGATTCCTAG

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_31015.p1 GENE.S_Transcript_31015~~S_Transcript_31015.p1 ORF type:5prime_partial len:232 (+),score=67.10,PPP4R2|PF09184.7|2.5e-14 S_Transcript_31015:2-697(+)
NNDLPQMPATNGGAESEHELSAEEVKGALEIIASTGKFWHDWDELKGMLVFQLKQVLSEYPEATKGDDQQNSSLGESYPELAQRLEAALFSFIEGPPFTLQRLCEILLNARTIYPNLSKLALALEKNLLVTSTITKSTDPYPSSMMPVPNAPEEHIEDAQRQPEPEPEPQQPQPQPHSNSVENGGELATGDRDEVMSEVDTHVDDSMTIDMETFEEIISSSEGNPESVIDS*

Click here to download the sequence:
Link to NCBI Protein BLAST