Transcript Information: S_Transcript_31016.p1


Annotated TAIR IDAT5G17070.1
Annotated Gene NameCONTAINS InterPro DOMAIN/s: Protein phosphatase 4 core regulatory subunit R2 (InterPro:IPR015267); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink).
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr5:5613514-5616088 | Reverse length=277
E-Value2E-19
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10.59581346048911
Replicate 20.98788609959022
Replicate 31.3763235883284
Condition 2: 8 Hour
Replicate 10.1591447038592
Replicate 20.83477047163159
Replicate 31.1135144271259
Condition 3: 24 Hour
Replicate 11.1411506301057
Replicate 21.3530633776924
Replicate 31.3175694838493


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_31016.p1 GENE.S_Transcript_31016~~S_Transcript_31016.p1 ORF type:5prime_partial len:134 (+),score=27.79 S_Transcript_31016:2-403(+)
AATAATGACTTGCCCCAGATGCCTGCTACTAATGGAGGTGCGGAATCTGAGCATGAGCTATCTGCTGAAGAAGTGAAGGGTGCACTTGAAATCATAGCATCTACAGGAAAATTTTGGCATGATTGGGATGAGCTAAAGGGCATGCTAGTTTTTCAGCTGAAGCAGGTTCTTTCAGAATACCCAGAAGCAACAAAAGGTGATGATCAACAAAATTCCTCTTTGGGGGAGAGCTATATGGAGTTGGCGCAAAGGTTGGAGGCAGGTATCTATAAAGTTTTCTTCACCATGTCTCTTCTTCTGTGTATCTATTGTCCTTTGTCATTGGCATCTAGGCGCTATGTATTTGATTTTACAATTTTCGGTATTATGCTATACTTGTACTCATTTTTTGGCATCTGTTAG

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_31016.p1 GENE.S_Transcript_31016~~S_Transcript_31016.p1 ORF type:5prime_partial len:134 (+),score=27.79 S_Transcript_31016:2-403(+)
NNDLPQMPATNGGAESEHELSAEEVKGALEIIASTGKFWHDWDELKGMLVFQLKQVLSEYPEATKGDDQQNSSLGESYMELAQRLEAGIYKVFFTMSLLLCIYCPLSLASRRYVFDFTIFGIMLYLYSFFGIC*

Click here to download the sequence:
Link to NCBI Protein BLAST